Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_017403`
Query reference	OH1004
Location	Chr03:148324946-148326265 (-)
Description	Similar to ABF1: ABSCISIC ACID-INSENSITIVE 5-like protein 4 (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_017403 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 17 GO annotations and 6 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At1g49720`	Binds to the ABA-responsive element (ABRE).	No verified direct reference in this release
`At1g45249`	Involved in ABA and stress responses and acts as a positive component of glucose signal transduction.	Arabidopsis basic leucine zipper transcription factors involved in an abscisic acid-dependent signal transduction pathway under drought and high-salinity conditions.2000 · DOI: 10.1073/pnas.190309197 AREB1 is a transcription activator of novel ABRE-dependent ABA signaling that enhances drought stress tolerance in Arabidopsis.2005 · DOI: 10.1105/tpc.105.035659 Transcriptional regulation of ABI3- and ABA-responsive genes including RD29B and RD29A in seeds, germinating embryos, and seedlings of Arabidopsis.2006 · DOI: 10.1007/s11103-005-2418-5
`At2g41070`	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter and to the ABRE of the Em1 gene promoter.	No verified direct reference in this release

Rice

Reference gene ID	Possible function	Papers / DOI
`Os06g0211200`	Transcription factor involved in abscisic acid (ABA) signaling pathway.	Rice ABI5-Like1 regulates abscisic acid and auxin responses by affecting the expression of ABRE-containing genes.2011 · DOI: 10.1104/pp.111.173427 Constitutive activation of transcription factor OsbZIP46 improves drought tolerance in rice.2012 · DOI: 10.1104/pp.111.190389 Functional characterization and reconstitution of ABA signaling components using transient gene expression in rice protoplasts.2015 · DOI: 10.3389/fpls.2015.00614 MODD Mediates Deactivation and Degradation of OsbZIP46 to Negatively Regulate ABA Signaling and Drought Resistance in Rice.2016 · DOI: 10.1105/tpc.16.00171
`Os02g0766700`	Transcriptional activator that mediates abscisic acid (ABA) signaling.	Characterization of OsbZIP23 as a key player of the basic leucine zipper transcription factor family for conferring abscisic acid sensitivity and salinity and drought tolerance in rice.2008 · DOI: 10.1104/pp.108.128199 Feedback Regulation of ABA Signaling and Biosynthesis by a bZIP Transcription Factor Targets Drought-Resistance-Related Genes.2016 · DOI: 10.1104/pp.16.00469 OsREM4.1 Interacts with OsSERK1 to Coordinate the Interlinking between Abscisic Acid and Brassinosteroid Signaling in Rice.2016 · DOI: 10.1016/j.devcel.2016.06.011

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0006351	DNA-templated transcription	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.327; coverage=121.122; evalue=3.42e-63; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006355	regulation of DNA-templated transcription	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.327; coverage=121.122; evalue=3.42e-63; UniProt GO evidence=TAS:TIGR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009414	response to water deprivation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.071; coverage=130.033; evalue=1.87e-52; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009651	response to salt stress	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.071; coverage=130.033; evalue=1.87e-52; UniProt GO evidence=IEP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009737	response to abscisic acid	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.071; coverage=130.033; evalue=1.87e-52; UniProt GO evidence=IEP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009738	abscisic acid-activated signaling pathway	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.327; coverage=121.122; evalue=3.42e-63; UniProt GO evidence=TAS:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009789	positive regulation of abscisic acid-activated signaling pathway	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=39.564; coverage=105.941; evalue=1e-51; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010115	regulation of abscisic acid biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=35.907; coverage=85.479; evalue=8.08e-34; UniProt GO evidence=IEP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010255	glucose mediated signaling pathway	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.071; coverage=130.033; evalue=1.87e-52; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0045893	positive regulation of DNA-templated transcription	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.327; coverage=121.122; evalue=3.42e-63; UniProt GO evidence=IDA:TIGR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0090332	stomatal closure	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=35.907; coverage=85.479; evalue=8.08e-34; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.327; coverage=121.122; evalue=3.42e-63; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0000976	transcription cis-regulatory region binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.327; coverage=121.122; evalue=3.42e-63; UniProt GO evidence=IPI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0001216	DNA-binding transcription activator activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=35.907; coverage=85.479; evalue=8.08e-34; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003677	DNA binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.327; coverage=121.122; evalue=3.42e-63; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003700	DNA-binding transcription factor activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.327; coverage=121.122; evalue=3.42e-63; UniProt GO evidence=ISS:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0043565	sequence-specific DNA binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.327; coverage=121.122; evalue=3.42e-63; UniProt GO evidence=IPI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT1G45249	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.071; coverage=130.033; evalue=1.87e-52	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT1G49720	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.327; coverage=121.122; evalue=3.42e-63	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT2G41070	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=35.907; coverage=85.479; evalue=8.08e-34	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os02g0766700	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=38.304; coverage=112.871; evalue=2.06e-51	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os06g0211200	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=39.564; coverage=105.941; evalue=1e-51	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	osa:4340462	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=39.564; coverage=105.941; evalue=1e-51	UniProtKB/Swiss-Prot DAT 2026 current_release