基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_016515 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr03:125265647-125266777 (+) |
| 描述 | Similar to At3g07870: F-box protein At3g07870 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_016515 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 10 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At3g07870 |
F-box 蛋白 At3g07870。 | 暂无已核实直接文献 |
At3g06240 |
F-box/kelch 重复蛋白 At3g06240。 | 暂无已核实直接文献 |
At4g12560 |
SCF(ASK- Cullin-F-box) E3泛素连接酶复合物的组分,可能介导靶蛋白的泛素化及随后的蛋白酶体降解(通过相似性)。 | |
At1g12855 |
推测的 F-box 蛋白 At1g12855。 | 暂无已核实直接文献 |
At1g13200 |
假定的F-盒/凯尔希重复蛋白At1g13200。 | 暂无已核实直接文献 |
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0008284 | positive regulation of cell population proliferation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=27.865; 覆盖度=102.128; E 值=1.07e-28; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009626 | plant-type hypersensitive response | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=25.076; 覆盖度=86.968; E 值=6.17e-20; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016567 | protein ubiquitination | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=25.076; 覆盖度=86.968; E 值=6.17e-20; UniProt GO evidence=IEA:UniProtKB-UniPathway | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031146 | SCF-dependent proteasomal ubiquitin-dependent protein catabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=22.764; 覆盖度=98.138; E 值=3.27e-14; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031348 | negative regulation of defense response | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=25.076; 覆盖度=86.968; E 值=6.17e-20; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042177 | negative regulation of protein catabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=25.076; 覆盖度=86.968; E 值=6.17e-20; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=27.865; 覆盖度=102.128; E 值=1.07e-28; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=25.076; 覆盖度=86.968; E 值=6.17e-20; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009506 | plasmodesma | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=27.865; 覆盖度=102.128; E 值=1.07e-28; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004842 | ubiquitin-protein transferase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=22.764; 覆盖度=98.138; E 值=3.27e-14; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G12855 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=22.764; 覆盖度=98.138; E 值=3.27e-14 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G13200 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=22.835; 覆盖度=101.33; E 值=3.67e-14 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G06240 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=27.217; 覆盖度=86.968; E 值=3.15e-21 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G07870 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=27.865; 覆盖度=102.128; E 值=1.07e-28 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G12560 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=25.076; 覆盖度=86.968; E 值=6.17e-20 | UniProtKB/Swiss-Prot DAT 2026 current_release |