Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_016490`
Query reference	OH1004
Location	Chr03:124770764-124773800 (+)
Description	Similar to NUG2: Nuclear/nucleolar GTPase 2 (Oryza sativa subsp. indica OX%3D39946)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_016490 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 9 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At1g52980`	GTPase involved in pre-60S ribosomal subunit maturation.	Nuclear/nucleolar GTPase 2 proteins as a subfamily of YlqF/YawG GTPases function in pre-60S ribosomal subunit maturation of mono- and dicotyledonous plants.2011 · DOI: 10.1074/jbc.m110.200816

Rice

Reference gene ID	Possible function	Papers / DOI
`Os03g0352400`	GTPase involved in pre-60S ribosomal subunit maturation.	Nuclear/nucleolar GTPase 2 proteins as a subfamily of YlqF/YawG GTPases function in pre-60S ribosomal subunit maturation of mono- and dicotyledonous plants.2011 · DOI: 10.1074/jbc.m110.200816
`UniProt: A2XGQ1`	GTPase involved in pre-60S ribosomal subunit maturation.	No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0042254	ribosome biogenesis	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=76.55; coverage=99.231; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=76.55; coverage=99.231; evalue=0.0; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005730	nucleolus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.905; coverage=101.154; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0016020	membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=51.606; coverage=95.769; evalue=1.56e-175; UniProt GO evidence=HDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003723	RNA binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=51.606; coverage=95.769; evalue=1.56e-175; UniProt GO evidence=HDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003729	mRNA binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=76.55; coverage=99.231; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003924	GTPase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=76.55; coverage=99.231; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005525	GTP binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.905; coverage=101.154; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0016787	hydrolase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.905; coverage=101.154; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT1G52980	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=76.55; coverage=99.231; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os03g0352400	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.905; coverage=101.154; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	hsa:29889	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=51.606; coverage=95.769; evalue=1.56e-175	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	mmu:230737	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=50.385; coverage=100.0; evalue=6.94e-176	UniProtKB/Swiss-Prot DAT 2026 current_release