RubberDandelionOmics 橡胶草多组学网站
更多
转录组数据查询 注释 橡胶合成 转录因子预测 靶基因 蛋白关联网络 重测序 工具 下载
ZH EN

本页使用教程

基因注释

展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。

示例 TkA01G624900 LXL04_000258 文献示例 LXL04_039733 TkAUNG001940

查询结果

下载当前结果

基因 IDLXL04_016363
当前查询版本OH1004
位置Chr03:120357258-120358317 (+)
描述Similar to MYB63: Transcription factor MYB63 (Arabidopsis thaliana OX%3D3702)
注释来源组装GCA_047496595.1_OSU_TarKok_2.0

功能注释来源：OH1004 · LXL04_016363 · GCA_047496595.1_OSU_TarKok_2.0。

当前查询返回来自 OH1004 注释条目的 24 条 GO 注释和 4 条 KEGG 基因交叉引用；只下载当前查询结果，不据此推断 KEGG 通路成员。

拟南芥 / 水稻参考基因与文献

文献对应拟南芥或水稻参考基因；橡胶草的功能关联来自当前参考组装的蛋白序列比对。

下载当前基因文献

拟南芥

参考基因 ID可能功能对应论文 / DOI
At1g79180 转录激活因子，结合 DNA 上的 AC 顺式元件 5'-ACCTACC-3'、5'-ACCAACC-3' 和 5'-ACCTAAC-3' 的启动子，并在 SND1 介导的次级细胞壁形成过程中特异性激活木质素生物合成基因。
MYB58 and MYB63 are transcriptional activators of the lignin biosynthetic pathway during secondary cell wall formation in Arabidopsis.2009 · DOI: 10.1105/tpc.108.063321
At1g16490 转录激活因子，结合 DNA 上的 AC 顺式元件 5'-ACCTACC-3'、5'-ACCAACC-3' 和 5'-ACCTAAC-3' 的启动子，并在 SND1 介导的次级细胞壁形成过程中特异性激活木质素生物合成基因。
MYB58 and MYB63 are transcriptional activators of the lignin biosynthetic pathway during secondary cell wall formation in Arabidopsis.2009 · DOI: 10.1105/tpc.108.063321
At1g56160 参与金属离子稳态，包括通过调节NAS4和NAS2基因表达获得铁离子（Fe）。
Expression differences for genes involved in lignin, glutathione and sulphate metabolism in response to cadmium in Arabidopsis thaliana and the related Zn/Cd-hyperaccumulator Thlaspi caerulescens.2008 · DOI: 10.1111/j.1365-3040.2007.01764.x
MYB72 is required in early signaling steps of rhizobacteria-induced systemic resistance in Arabidopsis.2008 · DOI: 10.1104/pp.107.113829
MYB72, a node of convergence in induced systemic resistance triggered by a fungal and a bacterial beneficial microbe.2009 · DOI: 10.1111/j.1438-8677.2008.00162.x
β-Glucosidase BGLU42 is a MYB72-dependent key regulator of rhizobacteria-induced systemic resistance and modulates iron deficiency responses in Arabidopsis roots.2014 · DOI: 10.1111/nph.12980
At2g31180 转录激活剂，通过影响 CBF 基因的表达来调节耐冻性。
AtMYB14 Regulates Cold Tolerance in Arabidopsis. 2013 · DOI: 10.1007/s11105-012-0481-z

水稻

当前来源表未检出该物种的同源命中。

GO / KEGG

以下 GO/KEGG 注释源自上述 OH1004 注释条目，保留原始同源转移证据及覆盖度；其来源物种范围与拟南芥/水稻直接比对表不同。

类型ID名称命名空间证据来源
GOGO:0002237response to molecule of bacterial origin生物过程Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=81.034; 覆盖度=45.669; E 值=1.33e-65; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006351DNA-templated transcription生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=80.172; 覆盖度=45.669; E 值=7.25e-67; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009409response to cold生物过程Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=59.509; 覆盖度=64.173; E 值=2.05e-62; UniProt GO evidence=IEP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009411response to UV生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=80.172; 覆盖度=45.669; E 值=7.25e-67; UniProt GO evidence=IEP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009416response to light stimulus生物过程Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=79.31; 覆盖度=45.669; E 值=9.23e-66; UniProt GO evidence=IEP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009809lignin biosynthetic process生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=80.172; 覆盖度=45.669; E 值=7.25e-67; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009866induced systemic resistance, ethylene mediated signaling pathway生物过程Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=81.034; 覆盖度=45.669; E 值=1.33e-65; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010043response to zinc ion生物过程Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=81.034; 覆盖度=45.669; E 值=1.33e-65; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010447response to acidic pH生物过程Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=81.034; 覆盖度=45.669; E 值=1.33e-65; UniProt GO evidence=IEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010468regulation of gene expression生物过程Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=81.034; 覆盖度=45.669; E 值=1.33e-65; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0019748secondary metabolic process生物过程Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=81.034; 覆盖度=45.669; E 值=1.33e-65; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0045893positive regulation of DNA-templated transcription生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=80.172; 覆盖度=45.669; E 值=7.25e-67; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0050826response to freezing生物过程Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=59.509; 覆盖度=64.173; E 值=2.05e-62; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0051365cellular response to potassium ion starvation生物过程Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=81.034; 覆盖度=45.669; E 值=1.33e-65; UniProt GO evidence=IEP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0098849cellular detoxification of cadmium ion生物过程Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=81.034; 覆盖度=45.669; E 值=1.33e-65; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:1901141regulation of lignin biosynthetic process生物过程Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=52.525; 覆盖度=77.953; E 值=2.01e-62; UniProt GO evidence=IEA:UniProtKB-ARBAUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:1990359stress response to zinc ion生物过程Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=81.034; 覆盖度=45.669; E 值=1.33e-65; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:1990532stress response to nickel ion生物过程Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=81.034; 覆盖度=45.669; E 值=1.33e-65; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:1990641response to iron ion starvation生物过程Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=81.034; 覆盖度=45.669; E 值=1.33e-65; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:2000652regulation of secondary cell wall biogenesis生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=80.172; 覆盖度=45.669; E 值=7.25e-67; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleus细胞组分Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=80.172; 覆盖度=45.669; E 值=7.25e-67; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000976transcription cis-regulatory region binding分子功能Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=80.172; 覆盖度=45.669; E 值=7.25e-67; UniProt GO evidence=IPI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003677DNA binding分子功能Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=81.034; 覆盖度=45.669; E 值=1.33e-65; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003700DNA-binding transcription factor activity分子功能Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=80.172; 覆盖度=45.669; E 值=7.25e-67; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G16490KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed 同源转移; 命中排序=2; 一致性=79.31; 覆盖度=45.669; E 值=9.23e-66UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G56160KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed 同源转移; 命中排序=3; 一致性=81.034; 覆盖度=45.669; E 值=1.33e-65UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G79180KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed 同源转移; 命中排序=1; 一致性=80.172; 覆盖度=45.669; E 值=7.25e-67UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT2G31180KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed 同源转移; 命中排序=5; 一致性=59.509; 覆盖度=64.173; E 值=2.05e-62UniProtKB/Swiss-Prot DAT 2026 current_release