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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_016227
Query referenceOH1004
LocationChr03:115721566-115725981 (-)
Description
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_016227 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 40 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At3g20290 Involved in endocytosis positive regulation.
AtEHDs, novel Arabidopsis EH-domain-containing proteins involved in endocytosis.2008 · DOI: 10.1111/j.1365-313x.2008.03571.x
EHD1 functions in endosomal recycling and confers salt tolerance.2013 · DOI: 10.1371/journal.pone.0054533
At4g05520 Involved in endocytosis negative regulation, probably by influencing actin organization.
AtEHDs, novel Arabidopsis EH-domain-containing proteins involved in endocytosis.2008 · DOI: 10.1111/j.1365-313x.2008.03571.x
The coiled-coil domain of EHD2 mediates inhibition of LeEix2 endocytosis and signaling.2009 · DOI: 10.1371/journal.pone.0007973

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006886intracellular protein transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=54.103; coverage=73.585; evalue=3.98e-156; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006897endocytosisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.356; coverage=100.189; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010886positive regulation of cholesterol storageBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=54.103; coverage=73.585; evalue=3.98e-156; UniProt GO evidence=ISO:RGDUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016197endosomal transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.356; coverage=100.189; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0032456endocytic recyclingBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.356; coverage=100.189; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0032956regulation of actin cytoskeleton organizationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=75.188; coverage=100.377; evalue=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0034383low-density lipoprotein particle clearanceBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=54.103; coverage=73.585; evalue=3.98e-156; UniProt GO evidence=ISO:RGDUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042538hyperosmotic salinity responseBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.356; coverage=100.189; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042632cholesterol homeostasisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=54.103; coverage=73.585; evalue=3.98e-156; UniProt GO evidence=ISO:RGDUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0051260protein homooligomerizationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.356; coverage=100.189; evalue=0.0; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0060271cilium assemblyBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=54.103; coverage=73.585; evalue=3.98e-156; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0061512protein localization to ciliumBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=54.103; coverage=73.585; evalue=3.98e-156; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0072659protein localization to plasma membraneBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=54.103; coverage=73.585; evalue=3.98e-156; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:1990090cellular response to nerve growth factor stimulusBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=54.103; coverage=73.585; evalue=3.98e-156; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:2001137positive regulation of endocytic recyclingBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=54.103; coverage=73.585; evalue=3.98e-156; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=75.188; coverage=100.377; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.356; coverage=100.189; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005768endosomeCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.356; coverage=100.189; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005769early endosomeCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=54.103; coverage=73.585; evalue=3.98e-156; UniProt GO evidence=ISO:RGDUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005811lipid dropletCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=54.103; coverage=73.585; evalue=3.98e-156; UniProt GO evidence=ISO:RGDUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005886plasma membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.356; coverage=100.189; evalue=0.0; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005929ciliumCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=54.103; coverage=73.585; evalue=3.98e-156; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009506plasmodesmaCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.356; coverage=100.189; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010008endosome membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.356; coverage=100.189; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016020membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.356; coverage=100.189; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0020018ciliary pocket membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=54.103; coverage=73.585; evalue=3.98e-156; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0030139endocytic vesicleCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=54.103; coverage=73.585; evalue=3.98e-156; UniProt GO evidence=ISO:RGDUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031095platelet dense tubular network membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=54.103; coverage=73.585; evalue=3.98e-156; UniProt GO evidence=ISO:RGDUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031901early endosome membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=54.103; coverage=73.585; evalue=3.98e-156; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0035869ciliary transition zoneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=54.103; coverage=73.585; evalue=3.98e-156; UniProt GO evidence=ISO:RGDUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048471perinuclear region of cytoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=54.103; coverage=73.585; evalue=3.98e-156; UniProt GO evidence=ISO:RGDUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0055038recycling endosome membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=54.103; coverage=73.585; evalue=3.98e-156; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003925G protein activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.356; coverage=100.189; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-ECUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005509calcium ion bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.356; coverage=100.189; evalue=0.0; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005524ATP bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=54.103; coverage=73.585; evalue=3.98e-156; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005525GTP bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.356; coverage=100.189; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0030674protein-macromolecule adaptor activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.356; coverage=100.189; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031267small GTPase bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=54.103; coverage=73.585; evalue=3.98e-156; UniProt GO evidence=ISO:RGDUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042802identical protein bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=54.103; coverage=73.585; evalue=3.98e-156; UniProt GO evidence=ISO:RGDUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0045296cadherin bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=54.103; coverage=73.585; evalue=7.89e-156; UniProt GO evidence=IEA:TreeGrafterUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G20290KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.356; coverage=100.189; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G05520KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=75.188; coverage=100.377; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGmmu:13660KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.103; coverage=73.585; evalue=3.98e-156UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGpon:100172373KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=54.103; coverage=73.585; evalue=7.89e-156UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGrno:293692KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=54.103; coverage=73.585; evalue=3.98e-156UniProtKB/Swiss-Prot DAT 2026 current_release