基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_016125 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr03:111345409-111346921 (+) |
| 描述 | Similar to Probable U6 snRNA-associated Sm-like protein LSm4 (Nicotiana tabacum OX%3D4097) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源：OH1004 · LXL04_016125 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 23 条 GO 注释和 3 条 KEGG 基因交叉引用；只下载当前查询结果，不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因；橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At5g27720 |
LSM 蛋白复合物的组成部分，参与 RNA 加工。 | 暂无已核实直接文献 |
水稻
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
Os01g0256900 |
特异性结合 U6 snRNA 的 3' 端 U 序列。 | 暂无已核实直接文献 |
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目，保留原始同源转移证据及覆盖度；其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0000290 | deadenylation-dependent decapping of nuclear-transcribed mRNA | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=96.739; 覆盖度=61.333; E 值=3.37e-62; UniProt GO evidence=EXP:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000387 | spliceosomal snRNP assembly | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=88.71; 覆盖度=82.667; E 值=4.29e-77; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000398 | mRNA splicing, via spliceosome | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=94.565; 覆盖度=61.333; E 值=1.08e-63; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000956 | nuclear-transcribed mRNA catabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=88.71; 覆盖度=82.667; E 值=4.29e-77; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033962 | P-body assembly | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=88.71; 覆盖度=82.667; E 值=4.29e-77; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000932 | P-body | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=88.71; 覆盖度=82.667; E 值=4.29e-77; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=96.739; 覆盖度=61.333; E 值=3.37e-62; UniProt GO evidence=IDA:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=74.51; 覆盖度=68.0; E 值=3.35e-52; UniProt GO evidence=ISS:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005681 | spliceosomal complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=88.71; 覆盖度=82.667; E 值=4.29e-77; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005688 | U6 snRNP | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=88.71; 覆盖度=82.667; E 值=4.29e-77; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=74.51; 覆盖度=68.0; E 值=3.35e-52; UniProt GO evidence=ISS:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=96.739; 覆盖度=61.333; E 值=3.37e-62; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009536 | plastid | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=96.739; 覆盖度=61.333; E 值=3.37e-62; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=74.51; 覆盖度=68.0; E 值=3.35e-52; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032991 | protein-containing complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=74.51; 覆盖度=68.0; E 值=3.35e-52; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046540 | U4/U6 x U5 tri-snRNP complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=74.51; 覆盖度=68.0; E 值=3.35e-52; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071005 | U2-type precatalytic spliceosome | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=74.51; 覆盖度=68.0; E 值=3.35e-52; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071011 | precatalytic spliceosome | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=74.51; 覆盖度=68.0; E 值=3.35e-52; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0097526 | spliceosomal tri-snRNP complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=88.71; 覆盖度=82.667; E 值=4.29e-77; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0120115 | Lsm2-8 complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=88.71; 覆盖度=82.667; E 值=4.29e-77; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=94.565; 覆盖度=61.333; E 值=1.08e-63; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0017070 | U6 snRNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=88.71; 覆盖度=82.667; E 值=4.29e-77; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042731 | PH domain binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=74.51; 覆盖度=68.0; E 值=3.35e-52; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT5G27720 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=96.739; 覆盖度=61.333; E 值=3.37e-62 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os01g0256900 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=94.382; 覆盖度=59.333; E 值=4.78e-58 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:50783 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=74.51; 覆盖度=68.0; E 值=3.35e-52 | UniProtKB/Swiss-Prot DAT 2026 current_release |