Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_013832 |
|---|---|
| Query reference | OH1004 |
| Location | Chr03:36611907-36614327 (-) |
| Description | Similar to GFS10: CSC1-like protein At4g35870 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_013832 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 23 GO annotations and 2 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At4g35870 |
Acts as an osmosensitive calcium-permeable cation channel. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0001817 | regulation of cytokine production | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=21.899; coverage=81.017; evalue=3.14e-26; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003094 | glomerular filtration | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=23.622; coverage=78.784; evalue=4.39e-28; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006623 | protein targeting to vacuole | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.688; coverage=100.248; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007040 | lysosome organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=21.899; coverage=81.017; evalue=3.14e-26; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0036335 | intestinal stem cell homeostasis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=22.669; coverage=86.476; evalue=3.72e-27; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045428 | regulation of nitric oxide biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=21.899; coverage=81.017; evalue=3.14e-26; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050764 | regulation of phagocytosis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=21.899; coverage=81.017; evalue=3.14e-26; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0160069 | surfactant secretion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=22.669; coverage=86.476; evalue=3.72e-27; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005765 | lysosomal membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=22.669; coverage=86.476; evalue=3.72e-27; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005789 | endoplasmic reticulum membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=23.622; coverage=78.784; evalue=4.39e-28; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.688; coverage=100.248; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.688; coverage=100.248; evalue=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015629 | actin cytoskeleton | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=22.669; coverage=86.476; evalue=3.72e-27; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031901 | early endosome membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=22.669; coverage=86.476; evalue=3.72e-27; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034451 | centriolar satellite | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=23.267; coverage=80.521; evalue=6.66e-26; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003676 | nucleic acid binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=21.899; coverage=81.017; evalue=3.14e-26; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005227 | calcium-activated cation channel activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.688; coverage=100.248; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008381 | mechanosensitive monoatomic ion channel activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=23.267; coverage=80.521; evalue=6.66e-26; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0017128 | phospholipid scramblase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=22.669; coverage=86.476; evalue=3.72e-27; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0120019 | phosphatidylcholine transfer activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=22.669; coverage=86.476; evalue=3.72e-27; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140135 | mechanosensitive monoatomic cation channel activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=22.669; coverage=86.476; evalue=3.72e-27; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140338 | sphingomyelin transfer activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=22.669; coverage=86.476; evalue=3.72e-27; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990760 | osmolarity-sensing monoatomic cation channel activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=23.622; coverage=78.784; evalue=4.39e-28; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT4G35870 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.688; coverage=100.248; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:208795 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=23.267; coverage=80.521; evalue=6.66e-26 | UniProtKB/Swiss-Prot DAT 2026 current_release |