基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_012250 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr03:9072265-9074878 (-) |
| 描述 | Similar to ATE2: Arginyl-tRNA--protein transferase 2 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_012250 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 17 条 GO 注释和 4 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At3g11240 |
参与精氨酸与蛋白质 N 末端天冬氨酸或谷氨酸的翻译后缀合。 | |
At5g05700 |
参与精氨酸与蛋白质 N 末端天冬氨酸或谷氨酸的翻译后缀合。 |
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006511 | ubiquitin-dependent protein catabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=38.344; 覆盖度=77.403; E 值=1.64e-80; UniProt GO evidence=IDA:UniProt | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006979 | response to oxidative stress | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=38.344; 覆盖度=77.403; E 值=1.64e-80; UniProt GO evidence=IDA:UniProt | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009737 | response to abscisic acid | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=50.801; 覆盖度=105.228; E 值=0.0; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010029 | regulation of seed germination | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=50.801; 覆盖度=105.228; E 值=0.0; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010150 | leaf senescence | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=49.525; 覆盖度=106.577; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010498 | proteasomal protein catabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=50.801; 覆盖度=105.228; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016598 | protein arginylation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=38.344; 覆盖度=77.403; E 值=1.64e-80; UniProt GO evidence=NAS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0044314 | protein K27-linked ubiquitination | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=49.231; 覆盖度=32.884; E 值=5.6e-51; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050832 | defense response to fungus | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=50.801; 覆盖度=105.228; E 值=0.0; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050994 | regulation of lipid catabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=50.801; 覆盖度=105.228; E 值=0.0; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070534 | protein K63-linked ubiquitination | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=49.231; 覆盖度=32.884; E 值=5.6e-51; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071211 | protein targeting to vacuole involved in autophagy | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=49.231; 覆盖度=32.884; E 值=5.6e-51; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071596 | ubiquitin-dependent protein catabolic process via the N-end rule pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=38.344; 覆盖度=77.403; E 值=1.64e-80; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=50.801; 覆盖度=105.228; E 值=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=38.344; 覆盖度=77.403; E 值=1.64e-80; UniProt GO evidence=IDA:HPA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=50.801; 覆盖度=105.228; E 值=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004057 | arginyl-tRNA--protein transferase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=50.801; 覆盖度=105.228; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G11240 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=50.801; 覆盖度=105.228; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G05700 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=49.525; 覆盖度=106.577; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:11101 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=38.344; 覆盖度=77.403; E 值=1.64e-80 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:11907 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=49.231; 覆盖度=32.884; E 值=5.6e-51 | UniProtKB/Swiss-Prot DAT 2026 current_release |