RubberDandelionOmics 橡胶草多组学网站
更多
转录组数据查询 注释 橡胶合成 转录因子预测 靶基因 蛋白关联网络 重测序 工具 下载
ZH EN

本页使用教程

基因注释

展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。

示例 TkA01G624900 LXL04_000258 文献示例 LXL04_039733 TkAUNG001940

查询结果

下载当前结果

基因 IDLXL04_012097
当前查询版本OH1004
位置Chr03:6309348-6313789 (-)
描述Similar to AGO4A: Protein argonaute 4A (Oryza sativa subsp. japonica OX%3D39947)
注释来源组装GCA_047496595.1_OSU_TarKok_2.0

功能注释来源：OH1004 · LXL04_012097 · GCA_047496595.1_OSU_TarKok_2.0。

当前查询返回来自 OH1004 注释条目的 26 条 GO 注释和 6 条 KEGG 基因交叉引用；只下载当前查询结果，不据此推断 KEGG 通路成员。

拟南芥 / 水稻参考基因与文献

文献对应拟南芥或水稻参考基因；橡胶草的功能关联来自当前参考组装的蛋白序列比对。

下载当前基因文献

拟南芥

参考基因 ID可能功能对应论文 / DOI
At2g27040 与 RDM3 一起，是通过 DNA 甲基化和几个染色质位点的抑制性组蛋白修饰 实现转录基因沉默 所必需的。
ARGONAUTE4 control of locus-specific siRNA accumulation and DNA and histone methylation.2003 · DOI: 10.1126/science.1079695
Role of Arabidopsis ARGONAUTE4 in RNA-directed DNA methylation triggered by inverted repeats.2004 · DOI: 10.1016/j.cub.2004.06.055
The Arabidopsis chromatin-modifying nuclear siRNA pathway involves a nucleolar RNA processing center.2006 · DOI: 10.1016/j.cell.2006.05.031
An ARGONAUTE4-containing nuclear processing center colocalized with Cajal bodies in Arabidopsis thaliana.2006 · DOI: 10.1016/j.cell.2006.05.032
Distinct catalytic and non-catalytic roles of ARGONAUTE4 in RNA-directed DNA methylation.2006 · DOI: 10.1038/nature05198
Reiterated WG/GW motifs form functionally and evolutionarily conserved ARGONAUTE-binding platforms in RNAi-related components.2007 · DOI: 10.1101/gad.451207
ARGONAUTE4 is required for resistance to Pseudomonas syringae in Arabidopsis.2007 · DOI: 10.1105/tpc.107.054494
Sorting of small RNAs into Arabidopsis argonaute complexes is directed by the 5' terminal nucleotide.2008 · DOI: 10.1016/j.cell.2008.02.034
Viral genome methylation as an epigenetic defense against geminiviruses.2008 · DOI: 10.1128/jvi.00719-08
RNA polymerase V transcription guides ARGONAUTE4 to chromatin.2009 · DOI: 10.1038/ng.365
The Arabidopsis RNA-directed DNA methylation argonautes functionally diverge based on their expression and interaction with target loci.2010 · DOI: 10.1105/tpc.109.072199
Independent chromatin binding of ARGONAUTE4 and SPT5L/KTF1 mediates transcriptional gene silencing.2011 · DOI: 10.1371/journal.pgen.1002120
At5g21150 参与 RNA 介导的转录后基因沉默。
The Arabidopsis RNA-directed DNA methylation argonautes functionally diverge based on their expression and interaction with target loci.2010 · DOI: 10.1105/tpc.109.072199
Control of female gamete formation by a small RNA pathway in Arabidopsis.2010 · DOI: 10.1038/nature08828
ARGONAUTE9-dependent silencing of transposable elements in pericentromeric regions of Arabidopsis.2010 · DOI: 10.1038/nature08828

水稻

参考基因 ID可能功能对应论文 / DOI
Os01g0275600 可能参与RNA沉默途径。 暂无已核实直接文献
Os04g0151800 可能参与RNA沉默途径。 暂无已核实直接文献
UniProt: Q5NBN9 可能参与RNA沉默途径。 暂无已核实直接文献

GO / KEGG

以下 GO/KEGG 注释源自上述 OH1004 注释条目，保留原始同源转移证据及覆盖度；其来源物种范围与拟南芥/水稻直接比对表不同。

类型ID名称命名空间证据来源
GOGO:0006351DNA-templated transcription生物过程Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=43.182; 覆盖度=17.121; E 值=1.59e-16; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006417regulation of translation生物过程Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=43.182; 覆盖度=17.121; E 值=1.59e-16; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009554megasporogenesis生物过程Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=42.105; 覆盖度=17.25; E 值=4.94e-16; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010526transposable element silencing生物过程Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=42.105; 覆盖度=17.25; E 值=4.94e-16; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0030422siRNA processing生物过程Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=43.182; 覆盖度=17.121; E 值=1.59e-16; UniProt GO evidence=IDA:FlyBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031047regulatory ncRNA-mediated gene silencing生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=44.697; 覆盖度=17.121; E 值=1.08e-19; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031048regulatory ncRNA-mediated heterochromatin formation生物过程Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=43.182; 覆盖度=17.121; E 值=1.59e-16; UniProt GO evidence=TAS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031507heterochromatin formation生物过程Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=43.182; 覆盖度=17.121; E 值=1.59e-16; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042742defense response to bacterium生物过程Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=43.182; 覆盖度=17.121; E 值=1.59e-16; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048481plant ovule development生物过程Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=42.105; 覆盖度=17.25; E 值=4.94e-16; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0051607defense response to virus生物过程Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=43.182; 覆盖度=17.121; E 值=1.59e-16; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0080188gene silencing by siRNA-directed DNA methylation生物过程Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=43.182; 覆盖度=17.121; E 值=1.59e-16; UniProt GO evidence=IDA:FlyBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:1904159megasporocyte differentiation生物过程Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=42.105; 覆盖度=17.25; E 值=4.94e-16; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000791euchromatin细胞组分Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=43.182; 覆盖度=17.121; E 值=1.59e-16; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleus细胞组分Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=44.697; 覆盖度=17.121; E 值=1.08e-19; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005654nucleoplasm细胞组分Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=43.182; 覆盖度=17.121; E 值=1.59e-16; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005730nucleolus细胞组分Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=43.182; 覆盖度=17.121; E 值=1.59e-16; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasm细胞组分Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=44.697; 覆盖度=17.121; E 值=1.08e-19; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0015030Cajal body细胞组分Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=43.182; 覆盖度=17.121; E 值=1.59e-16; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0036464cytoplasmic ribonucleoprotein granule细胞组分Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=43.182; 覆盖度=17.121; E 值=1.59e-16; UniProt GO evidence=IDA:FlyBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:1990904ribonucleoprotein complex细胞组分Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=43.182; 覆盖度=17.121; E 值=1.59e-16; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003682chromatin binding分子功能Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=43.182; 覆盖度=17.121; E 值=1.59e-16; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003723RNA binding分子功能Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=44.697; 覆盖度=17.121; E 值=1.08e-19; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0004521RNA endonuclease activity分子功能Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=44.697; 覆盖度=17.121; E 值=1.08e-19; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0035197siRNA binding分子功能Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=43.182; 覆盖度=17.121; E 值=1.59e-16; UniProt GO evidence=IDA:FlyBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0035198miRNA binding分子功能Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=43.182; 覆盖度=17.121; E 值=1.59e-16; UniProt GO evidence=IDA:CAFAUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT2G27040KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed 同源转移; 命中排序=3; 一致性=43.182; 覆盖度=17.121; E 值=1.59e-16UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G21150KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed 同源转移; 命中排序=4; 一致性=42.105; 覆盖度=17.25; E 值=4.94e-16UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os01g0275200KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed 同源转移; 命中排序=5; 一致性=36.552; 覆盖度=18.807; E 值=1.18e-12UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os01g0275600KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed 同源转移; 命中排序=1; 一致性=44.697; 覆盖度=17.121; E 值=1.08e-19UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os04g0151800KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed 同源转移; 命中排序=2; 一致性=43.609; 覆盖度=17.25; E 值=1.22e-17UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGosa:4324438KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed 同源转移; 命中排序=1; 一致性=44.697; 覆盖度=17.121; E 值=1.08e-19UniProtKB/Swiss-Prot DAT 2026 current_release