Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_012029 |
|---|---|
| Query reference | OH1004 |
| Location | Chr03:5126423-5127001 (-) |
| Description | Similar to PMEI4: Pectinesterase inhibitor 4 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_012029 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 11 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At4g25250 |
Pectin methylesterase (PME) inhibitor that can target the root-expressed PME17 and PME3 in a pH-dependent manner, mainly in slightly acidic conditions (pH 6.3 and 5.0) but not at pH 7.5; this processus relies on changes in the protonation of amino acids involved in intermolecular and intramolecular interactions. | |
At4g25260 |
Pectin methylesterase (PME) inhibitor that can target PME3 in a pH-dependent manner, mainly in slightly acidic conditions (pH 6.0 and 5.0) but not at pH 7.0. | |
At3g47380 |
Pectin methylesterase (PME) inhibitor involved in the maintenance of cell wall integrity in response to necrotrophic pathogens. | No verified direct reference in this release |
At1g62760 |
Pectin methylesterase (PME) inhibitor involved in the maintenance of cell wall integrity in response to necrotrophic pathogens. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0009641 | shade avoidance | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.862; coverage=98.438; evalue=3.19e-33; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009827 | plant-type cell wall modification | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=32.984; coverage=99.479; evalue=3.43e-34; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071669 | plant-type cell wall organization or biogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=37.234; coverage=97.917; evalue=5.93e-33; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000280 | regulation of root development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=32.984; coverage=99.479; evalue=3.43e-34; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005576 | extracellular region | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=37.234; coverage=97.917; evalue=5.93e-33; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.608; coverage=82.292; evalue=1.66e-31; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009505 | plant-type cell wall | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=32.984; coverage=99.479; evalue=3.43e-34; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=32.984; coverage=99.479; evalue=3.43e-34; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048046 | apoplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=32.984; coverage=99.479; evalue=3.43e-34; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004857 | enzyme inhibitor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=32.984; coverage=99.479; evalue=3.43e-34; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046910 | pectinesterase inhibitor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=32.984; coverage=99.479; evalue=3.43e-34; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G62760 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.608; coverage=82.292; evalue=1.66e-31 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G47380 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=37.234; coverage=97.917; evalue=5.93e-33 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G25250 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=32.984; coverage=99.479; evalue=3.43e-34 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G25260 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.862; coverage=98.438; evalue=3.19e-33 | UniProtKB/Swiss-Prot DAT 2026 current_release |