基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_009911 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr02:135823710-135829763 (-) |
| 描述 | Similar to Os04g0620700: Nucleolin 2 (Oryza sativa subsp. japonica OX%3D39947) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_009911 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 16 条 GO 注释和 4 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
水稻
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
Os04g0620700 |
参与前rRNA加工和核糖体组装。 | 暂无已核实直接文献 |
Os08g0192900 |
参与前rRNA加工和核糖体组装。 | 暂无已核实直接文献 |
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006364 | rRNA processing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=45.045; 覆盖度=36.938; E 值=1.49e-54; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010305 | leaf vascular tissue pattern formation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=38.967; 覆盖度=35.441; E 值=1.22e-37; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010588 | cotyledon vascular tissue pattern formation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=38.967; 覆盖度=35.441; E 值=1.22e-37; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042254 | ribosome biogenesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=38.967; 覆盖度=35.441; E 值=1.22e-37; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048364 | root development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=38.967; 覆盖度=35.441; E 值=1.22e-37; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048366 | leaf development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=38.967; 覆盖度=35.441; E 值=1.22e-37; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048367 | shoot system development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=38.967; 覆盖度=35.441; E 值=1.22e-37; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080056 | petal vascular tissue pattern formation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=38.967; 覆盖度=35.441; E 值=1.22e-37; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080057 | sepal vascular tissue pattern formation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=38.967; 覆盖度=35.441; E 值=1.22e-37; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=45.045; 覆盖度=36.938; E 值=1.49e-54; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005730 | nucleolus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=45.045; 覆盖度=36.938; E 值=1.49e-54; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=38.967; 覆盖度=35.441; E 值=1.22e-37; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=38.967; 覆盖度=35.441; E 值=1.22e-37; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=45.045; 覆盖度=36.938; E 值=1.49e-54; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003729 | mRNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=38.967; 覆盖度=35.441; E 值=1.22e-37; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031491 | nucleosome binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=41.045; 覆盖度=44.592; E 值=1.18e-47; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G48920 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=38.967; 覆盖度=35.441; E 值=1.22e-37 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G18610 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=41.045; 覆盖度=44.592; E 值=1.18e-47 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os04g0620700 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=45.045; 覆盖度=36.938; E 值=1.49e-54 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os08g0192900 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=44.393; 覆盖度=35.607; E 值=1.48e-45 | UniProtKB/Swiss-Prot DAT 2026 current_release |