基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_009622 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr02:129868238-129868888 (-) |
| 描述 | Similar to CSP4: Cold shock domain-containing protein 4 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源：OH1004 · LXL04_009622 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 28 条 GO 注释和 5 条 KEGG 基因交叉引用；只下载当前查询结果，不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因；橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At2g21060 |
分子伴护蛋白，可与RNA以及单链DNA和双链DNA（ssDNA和dsDNA）结合并解旋（通过相似性推测）。 | |
At4g36020 |
分子伴侣，能结合RNA、单链（ssDNA）和双链（dsDNA）DNA，并解旋核酸双链。 | |
At2g17870 |
分子伴侣，能结合RNA、单链（ssDNA）和双链（dsDNA）DNA，并解旋核酸双链。 | |
At4g38680 |
分子伴侣，可与 RNA、单链 和双链 DNA 结合，并解开核酸双链体。 |
Cold shock domain proteins and glycine-rich RNA-binding proteins from Arabidopsis thaliana can promote the cold adaptation process in Escherichia coli.2007 · DOI: 10.1093/nar/gkl1076 Arabidopsis COLD SHOCK DOMAIN PROTEIN2 is a RNA chaperone that is regulated by cold and developmental signals.2007 · DOI: 10.1016/j.bbrc.2007.10.059
|
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目，保留原始同源转移证据及覆盖度；其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0009269 | response to desiccation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=57.346; 覆盖度=97.685; E 值=2.83e-29; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009409 | response to cold | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=58.333; 覆盖度=94.444; E 值=5.07e-38; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009414 | response to water deprivation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=41.704; 覆盖度=103.241; E 值=2.68e-35; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009631 | cold acclimation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=41.704; 覆盖度=103.241; E 值=2.68e-35; UniProt GO evidence=IGI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009651 | response to salt stress | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=41.704; 覆盖度=103.241; E 值=2.68e-35; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009737 | response to abscisic acid | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=57.346; 覆盖度=97.685; E 值=2.83e-29; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009793 | embryo development ending in seed dormancy | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=58.333; 覆盖度=94.444; E 值=5.07e-38; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009826 | unidimensional cell growth | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=44.55; 覆盖度=97.685; E 值=1.12e-29; UniProt GO evidence=IMP:CACAO | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010154 | fruit development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=58.333; 覆盖度=94.444; E 值=5.07e-38; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010228 | vegetative to reproductive phase transition of meristem | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=57.346; 覆盖度=97.685; E 值=2.83e-29; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043457 | regulation of cellular respiration | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=57.346; 覆盖度=97.685; E 值=2.83e-29; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048316 | seed development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=57.346; 覆盖度=97.685; E 值=2.83e-29; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048443 | stamen development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=57.346; 覆盖度=97.685; E 值=2.83e-29; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=58.333; 覆盖度=94.444; E 值=5.07e-38; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005730 | nucleolus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=58.333; 覆盖度=94.444; E 值=5.07e-38; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=41.704; 覆盖度=103.241; E 值=2.68e-35; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=44.55; 覆盖度=97.685; E 值=1.12e-29; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=58.333; 覆盖度=94.444; E 值=5.07e-38; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=41.704; 覆盖度=103.241; E 值=2.68e-35; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031982 | vesicle | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=57.346; 覆盖度=97.685; E 值=2.83e-29; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003676 | nucleic acid binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=57.346; 覆盖度=97.685; E 值=2.83e-29; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=58.333; 覆盖度=94.444; E 值=5.07e-38; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003690 | double-stranded DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=41.704; 覆盖度=103.241; E 值=2.68e-35; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003697 | single-stranded DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=41.704; 覆盖度=103.241; E 值=2.68e-35; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=41.704; 覆盖度=103.241; E 值=2.68e-35; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003729 | mRNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=58.333; 覆盖度=94.444; E 值=5.07e-38; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=58.333; 覆盖度=94.444; E 值=5.07e-38; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140691 | RNA folding chaperone | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=41.704; 覆盖度=103.241; E 值=2.68e-35; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G17870 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=44.55; 覆盖度=97.685; E 值=1.12e-29 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G21060 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=58.333; 覆盖度=94.444; E 值=5.07e-38 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G36020 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=41.704; 覆盖度=103.241; E 值=2.68e-35 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G38680 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=57.346; 覆盖度=97.685; E 值=2.83e-29 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | nsy:104218376 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=70.37; 覆盖度=37.5; E 值=1.23e-30 | UniProtKB/Swiss-Prot DAT 2026 current_release |