基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_009615 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr02:129772136-129774111 (+) |
| 描述 | Similar to BC1L6: COBRA-like protein 1 (Oryza sativa subsp. japonica OX%3D39947) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_009615 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 15 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At3g02210 |
COBRA样蛋白 1。 | 暂无已核实直接文献 |
At3g29810 |
COBRA样蛋白2。 | 暂无已核实直接文献 |
At5g15630 |
类 COBRA 蛋白 4。 | 暂无已核实直接文献 |
水稻
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
Os07g0604300 |
参与决定细胞扩张方向,可能通过在纤维素沉积中起重要作用。 | 暂无已核实直接文献 |
Os03g0416300 |
COBRA样蛋白2。 | 暂无已核实直接文献 |
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0009664 | plant-type cell wall organization | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=45.823; 覆盖度=95.662; E 值=2.81e-136; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009832 | plant-type cell wall biogenesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=45.823; 覆盖度=95.662; E 值=2.81e-136; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009834 | plant-type secondary cell wall biogenesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=44.471; 覆盖度=94.977; E 值=7.72e-135; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010214 | seed coat development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=45.823; 覆盖度=95.662; E 值=2.81e-136; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010215 | cellulose microfibril organization | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=46.731; 覆盖度=94.292; E 值=2.4e-143; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048316 | seed development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=45.823; 覆盖度=95.662; E 值=2.81e-136; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048354 | mucilage biosynthetic process involved in seed coat development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=45.823; 覆盖度=95.662; E 值=2.81e-136; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0052324 | plant-type cell wall cellulose biosynthetic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=46.731; 覆盖度=94.292; E 值=2.4e-143; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2001006 | regulation of cellulose biosynthetic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=44.471; 覆盖度=94.977; E 值=7.72e-135; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000325 | plant-type vacuole | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=44.471; 覆盖度=94.977; E 值=7.72e-135; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005794 | Golgi apparatus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=45.823; 覆盖度=95.662; E 值=2.81e-136; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005797 | Golgi medial cisterna | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=45.823; 覆盖度=95.662; E 值=2.81e-136; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=46.731; 覆盖度=94.292; E 值=2.4e-143; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=43.567; 覆盖度=101.142; E 值=1.24e-138; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0098552 | side of membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=46.731; 覆盖度=94.292; E 值=2.4e-143; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G02210 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=43.567; 覆盖度=101.142; E 值=1.24e-138 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G29810 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=45.823; 覆盖度=95.662; E 值=2.81e-136 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G15630 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=44.471; 覆盖度=94.977; E 值=7.72e-135 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os03g0416300 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=46.588; 覆盖度=97.032; E 值=8.57e-142 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os07g0604300 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=46.731; 覆盖度=94.292; E 值=2.4e-143 | UniProtKB/Swiss-Prot DAT 2026 current_release |