Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_009506 |
|---|---|
| Query reference | OH1004 |
| Location | Chr02:127649358-127655296 (-) |
| Description | Similar to TAR2: Tryptophan aminotransferase-related protein 2 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_009506 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 35 GO annotations and 6 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At4g24670 |
Involved in auxin production. | No verified direct reference in this release |
At1g70560 |
L-tryptophan aminotransferase involved in auxin (IAA) biosynthesis. | |
At1g23320 |
Probably involved in auxin production. | No verified direct reference in this release |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os05g0169300 |
Probable tryptophan aminotransferase that may be involved in the regulation of auxin production in developing rice grains. | |
Os01g0169800 |
Probable tryptophan aminotransferase involved in auxin (IAA) biosynthesis. |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006520 | amino acid metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.709; coverage=98.891; evalue=4.08e-168; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009641 | shade avoidance | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.749; coverage=79.379; evalue=1.29e-136; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009684 | indoleacetic acid biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.709; coverage=98.891; evalue=4.08e-168; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009723 | response to ethylene | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.709; coverage=98.891; evalue=4.08e-168; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009793 | embryo development ending in seed dormancy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.709; coverage=98.891; evalue=4.08e-168; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009851 | auxin biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=54.25; coverage=88.692; evalue=2e-153; UniProt GO evidence=IEA:UniProtKB-UniPathway | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009908 | flower development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.709; coverage=98.891; evalue=4.08e-168; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009926 | auxin polar transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.749; coverage=79.379; evalue=1.29e-136; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009958 | positive gravitropism | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.709; coverage=98.891; evalue=4.08e-168; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010078 | maintenance of root meristem identity | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.709; coverage=98.891; evalue=4.08e-168; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010087 | phloem or xylem histogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.709; coverage=98.891; evalue=4.08e-168; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010588 | cotyledon vascular tissue pattern formation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.709; coverage=98.891; evalue=4.08e-168; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042742 | defense response to bacterium | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.709; coverage=98.891; evalue=4.08e-168; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043562 | cellular response to nitrogen levels | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.709; coverage=98.891; evalue=4.08e-168; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048364 | root development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.749; coverage=79.379; evalue=1.29e-136; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048366 | leaf development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.749; coverage=79.379; evalue=1.29e-136; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048367 | shoot system development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.709; coverage=98.891; evalue=4.08e-168; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048467 | gynoecium development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.709; coverage=98.891; evalue=4.08e-168; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048527 | lateral root development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.709; coverage=98.891; evalue=4.08e-168; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048825 | cotyledon development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.709; coverage=98.891; evalue=4.08e-168; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080022 | primary root development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.709; coverage=98.891; evalue=4.08e-168; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.749; coverage=79.379; evalue=1.29e-136; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.749; coverage=79.379; evalue=1.29e-136; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005789 | endoplasmic reticulum membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.709; coverage=98.891; evalue=4.08e-168; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004021 | L-alanine:2-oxoglutarate aminotransferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.749; coverage=79.379; evalue=1.29e-136; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008483 | transaminase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.709; coverage=98.891; evalue=4.08e-168; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016846 | carbon-sulfur lyase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.709; coverage=98.891; evalue=4.08e-168; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030170 | pyridoxal phosphate binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.749; coverage=79.379; evalue=1.29e-136; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0047312 | L-phenylalanine-pyruvate transaminase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.749; coverage=79.379; evalue=1.29e-136; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050362 | L-tryptophan:2-oxoglutarate aminotransferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.709; coverage=98.891; evalue=4.08e-168; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0052654 | L-leucine-2-oxoglutarate transaminase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.749; coverage=79.379; evalue=1.29e-136; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080097 | L-tryptophan:pyruvate aminotransferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.709; coverage=98.891; evalue=4.08e-168; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080098 | L-tyrosine-pyruvate transaminase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.749; coverage=79.379; evalue=1.29e-136; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080099 | L-methionine:2-oxoglutarate aminotransferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.749; coverage=79.379; evalue=1.29e-136; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080130 | L-phenylalanine-2-oxoglutarate transaminase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.749; coverage=79.379; evalue=1.29e-136; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G23320 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=54.062; coverage=79.157; evalue=2.26e-136 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G70560 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.749; coverage=79.379; evalue=1.29e-136 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G24670 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.709; coverage=98.891; evalue=4.08e-168 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os01g0169800 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=55.764; coverage=82.705; evalue=2.54e-139 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os05g0169300 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=54.25; coverage=88.692; evalue=2e-153 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | osa:4337930 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=54.25; coverage=88.692; evalue=2e-153 | UniProtKB/Swiss-Prot DAT 2026 current_release |