Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_007313 |
|---|---|
| Query reference | OH1004 |
| Location | Chr02:44019406-44021387 (-) |
| Description | Similar to LARP1C: La-related protein 1C (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_007313 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 46 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At4g35890 |
Promotes leaf senescence mediated by abscisic acid (ABA), salicylic acid (SA) and jasmonic acid (MeJA), probably though the induction of expression of senescence-associated genes (SAGs) and defense-related genes. | |
At5g66100 |
Promotes leaf senescence. | No verified direct reference in this release |
At5g21160 |
Required for acclimation and survival during thermal stress. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006402 | mRNA catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.972; coverage=28.07; evalue=1.23e-23; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006413 | translational initiation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=40.206; coverage=18.908; evalue=1.58e-16; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008283 | cell population proliferation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=40.206; coverage=18.908; evalue=1.58e-16; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009737 | response to abscisic acid | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.951; coverage=100.39; evalue=2.84e-60; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009738 | abscisic acid-activated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.951; coverage=100.39; evalue=2.84e-60; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009749 | response to glucose | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.972; coverage=28.07; evalue=1.23e-23; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009751 | response to salicylic acid | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.951; coverage=100.39; evalue=2.84e-60; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009753 | response to jasmonic acid | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.951; coverage=100.39; evalue=2.84e-60; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010150 | leaf senescence | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.951; coverage=100.39; evalue=2.84e-60; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010286 | heat acclimation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.972; coverage=28.07; evalue=1.23e-23; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010608 | post-transcriptional regulation of gene expression | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=40.206; coverage=18.908; evalue=1.58e-16; UniProt GO evidence=IDA:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016239 | positive regulation of macroautophagy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=40.206; coverage=18.908; evalue=1.58e-16; UniProt GO evidence=IMP:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0017148 | negative regulation of translation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=40.206; coverage=18.908; evalue=1.58e-16; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031929 | TOR signaling | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=40.206; coverage=18.908; evalue=1.58e-16; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0038202 | TORC1 signaling | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=40.206; coverage=18.908; evalue=1.58e-16; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042254 | ribosome biogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.972; coverage=28.07; evalue=1.23e-23; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045070 | positive regulation of viral genome replication | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=40.206; coverage=18.908; evalue=1.58e-16; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045727 | positive regulation of translation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=51.136; coverage=17.154; evalue=2.05e-20; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045947 | negative regulation of translational initiation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=40.206; coverage=18.908; evalue=1.58e-16; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045948 | positive regulation of translational initiation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=40.206; coverage=18.908; evalue=1.58e-16; UniProt GO evidence=IMP:CACAO | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048255 | mRNA stabilization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.972; coverage=28.07; evalue=1.23e-23; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070370 | cellular heat acclimation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.972; coverage=28.07; evalue=1.23e-23; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0072752 | cellular response to rapamycin | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=40.206; coverage=18.908; evalue=1.58e-16; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1903432 | regulation of TORC1 signaling | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.972; coverage=28.07; evalue=1.23e-23; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990928 | response to amino acid starvation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=40.206; coverage=18.908; evalue=1.58e-16; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000932 | P-body | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.972; coverage=28.07; evalue=1.23e-23; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.293; coverage=50.487; evalue=6.57e-34; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.951; coverage=100.39; evalue=2.84e-60; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.972; coverage=28.07; evalue=1.23e-23; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.951; coverage=100.39; evalue=2.84e-60; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.951; coverage=100.39; evalue=2.84e-60; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009536 | plastid | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.972; coverage=28.07; evalue=1.23e-23; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010494 | cytoplasmic stress granule | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.972; coverage=28.07; evalue=1.23e-23; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=40.206; coverage=18.908; evalue=1.58e-16; UniProt GO evidence=HDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000339 | RNA cap binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.972; coverage=28.07; evalue=1.23e-23; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000340 | RNA 7-methylguanosine cap binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=40.206; coverage=18.908; evalue=1.58e-16; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.951; coverage=100.39; evalue=2.84e-60; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003729 | mRNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.951; coverage=100.39; evalue=2.84e-60; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003730 | mRNA 3'-UTR binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=40.206; coverage=18.908; evalue=1.58e-16; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008190 | eukaryotic initiation factor 4E binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=40.206; coverage=18.908; evalue=1.58e-16; UniProt GO evidence=IPI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008494 | translation activator activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=40.206; coverage=18.908; evalue=1.58e-16; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031369 | translation initiation factor binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=40.206; coverage=18.908; evalue=1.58e-16; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043024 | ribosomal small subunit binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=40.206; coverage=18.908; evalue=1.58e-16; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045182 | translation regulator activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.972; coverage=28.07; evalue=1.23e-23; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045296 | cadherin binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=40.206; coverage=18.908; evalue=1.58e-16; UniProt GO evidence=HDA:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048027 | mRNA 5'-UTR binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.972; coverage=28.07; evalue=1.23e-23; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT4G35890 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.951; coverage=100.39; evalue=2.84e-60 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G21160 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.972; coverage=28.07; evalue=1.23e-23 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G66100 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=36.293; coverage=50.487; evalue=6.57e-34 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:23367 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=40.206; coverage=18.908; evalue=1.58e-16 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:55132 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=51.136; coverage=17.154; evalue=2.05e-20 | UniProtKB/Swiss-Prot DAT 2026 current_release |