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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_007218
Query referenceOH1004
LocationChr02:40071236-40072183 (-)
DescriptionSimilar to RTH: Protein RTE1-HOMOLOG (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_007218 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 10 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At3g51040 Protein RTE1-HOMOLOG. No verified direct reference in this release
At2g26070 Acts at an early step in the ethylene signaling pathway.
REVERSION-TO-ETHYLENE SENSITIVITY1, a conserved gene that regulates ethylene receptor function in Arabidopsis.2006 · DOI: 10.1073/pnas.0602239103
Involvement of RTE1 in conformational changes promoting ETR1 ethylene receptor signaling in Arabidopsis.2008 · DOI: 10.1111/j.1365-313x.2008.03615.x

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0009723response to ethyleneBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.709; coverage=87.97; evalue=1.11e-82; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010104regulation of ethylene-activated signaling pathwayBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.709; coverage=87.97; evalue=1.11e-82; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010105negative regulation of ethylene-activated signaling pathwayBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=49.289; coverage=79.323; evalue=3.34e-68; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0023056positive regulation of signalingBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.709; coverage=87.97; evalue=1.11e-82; UniProt GO evidence=IGI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000139Golgi membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=49.289; coverage=79.323; evalue=3.34e-68; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005739mitochondrionCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=49.289; coverage=79.323; evalue=3.34e-68; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005783endoplasmic reticulumCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.709; coverage=87.97; evalue=1.11e-82; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005789endoplasmic reticulum membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=49.289; coverage=79.323; evalue=3.34e-68; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005794Golgi apparatusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.709; coverage=87.97; evalue=1.11e-82; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016020membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.709; coverage=87.97; evalue=1.11e-82; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT2G26070KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=49.289; coverage=79.323; evalue=3.34e-68UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G51040KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.709; coverage=87.97; evalue=1.11e-82UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGhsa:84065KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=32.161; coverage=74.812; evalue=5.51e-32UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGmmu:52174KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=31.156; coverage=74.812; evalue=1.61e-30UniProtKB/Swiss-Prot DAT 2026 current_release