基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_007183 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr02:38326211-38330490 (+) |
| 描述 | Similar to RFC3: Replication factor C subunit 3 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_007183 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 19 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At5g27740 |
可能参与DNA复制,从而调节细胞增殖。 | 暂无已核实直接文献 |
水稻
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
Os03g0792600 |
可能参与DNA复制,从而调节细胞增殖。 | 暂无已核实直接文献 |
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0000076 | DNA replication checkpoint signaling | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=33.898; 覆盖度=48.493; E 值=1.03e-67; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000731 | DNA synthesis involved in DNA repair | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=33.898; 覆盖度=48.493; E 值=1.03e-67; UniProt GO evidence=TAS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006260 | DNA replication | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=34.844; 覆盖度=48.356; E 值=4.01e-69; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006261 | DNA-templated DNA replication | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=37.921; 覆盖度=48.767; E 值=2.41e-79; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006271 | DNA strand elongation involved in DNA replication | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=37.921; 覆盖度=48.767; E 值=2.41e-79; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006272 | leading strand elongation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=35.817; 覆盖度=47.808; E 值=4.04e-69; UniProt GO evidence=ISS:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006281 | DNA repair | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=37.921; 覆盖度=48.767; E 值=2.41e-79; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1900264 | positive regulation of DNA-directed DNA polymerase activity | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=34.844; 覆盖度=48.356; E 值=4.01e-69; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=37.921; 覆盖度=48.767; E 值=2.41e-79; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=34.844; 覆盖度=48.356; E 值=4.01e-69; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005663 | DNA replication factor C complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=37.921; 覆盖度=48.767; E 值=2.41e-79; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031389 | Rad17 RFC-like complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=34.844; 覆盖度=48.356; E 值=4.01e-69; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031390 | Ctf18 RFC-like complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=34.844; 覆盖度=48.356; E 值=4.01e-69; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031391 | Elg1 RFC-like complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=35.817; 覆盖度=47.808; E 值=4.04e-69; UniProt GO evidence=ISS:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=37.921; 覆盖度=48.767; E 值=2.41e-79; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003689 | DNA clamp loader activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=34.844; 覆盖度=48.356; E 值=4.01e-69; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=37.921; 覆盖度=48.767; E 值=2.41e-79; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008094 | ATP-dependent activity, acting on DNA | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=37.921; 覆盖度=48.767; E 值=2.41e-79; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0017116 | single-stranded DNA helicase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=34.844; 覆盖度=48.356; E 值=4.01e-69; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT5G27740 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=37.921; 覆盖度=48.767; E 值=2.41e-79 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ddi:DDB_G0293702 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=35.817; 覆盖度=47.808; E 值=4.04e-69 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os03g0792600 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=36.236; 覆盖度=48.767; E 值=1.16e-70 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:5983 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=33.898; 覆盖度=48.493; E 值=1.03e-67 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:69263 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=34.844; 覆盖度=48.356; E 值=4.01e-69 | UniProtKB/Swiss-Prot DAT 2026 current_release |