Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_007085 |
|---|---|
| Query reference | OH1004 |
| Location | Chr02:35559240-35559928 (-) |
| Description | Similar to RCE2: Probable NEDD8-conjugating enzyme Ubc12-like (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_007085 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 14 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At2g18600 |
Accepts the ubiquitin-like protein NEDD8/RUB1 from the ECR1-AXR1 E1 complex and catalyzes its covalent attachment to other proteins. | No verified direct reference in this release |
At4g36800 |
Accepts the ubiquitin-like protein NEDD8/RUB1 from the ECR1-AXR1 E1 complex and catalyzes its covalent attachment to other proteins. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0009733 | response to auxin | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=45.833; coverage=52.174; evalue=8.69e-13; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0036211 | protein modification process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.466; coverage=52.899; evalue=3.28e-12; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045116 | protein neddylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.222; coverage=52.174; evalue=1.79e-13; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.222; coverage=52.174; evalue=1.79e-13; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=41.096; coverage=52.899; evalue=2.8e-11; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005730 | nucleolus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=41.096; coverage=52.899; evalue=2.8e-11; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=45.833; coverage=52.174; evalue=8.69e-13; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.222; coverage=52.174; evalue=1.79e-13; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016604 | nuclear body | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=41.096; coverage=52.899; evalue=2.8e-11; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004842 | ubiquitin-protein transferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.466; coverage=52.899; evalue=3.28e-12; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.222; coverage=52.174; evalue=1.79e-13; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019787 | ubiquitin-like protein transferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=45.833; coverage=52.174; evalue=8.69e-13; UniProt GO evidence=IDA:TIGR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019788 | NEDD8 transferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.222; coverage=52.174; evalue=1.79e-13; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061654 | NEDD8 conjugating enzyme activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.466; coverage=52.899; evalue=3.28e-12; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G18600 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.222; coverage=52.174; evalue=1.79e-13 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G36800 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=45.833; coverage=52.174; evalue=8.69e-13 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:22192 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=41.096; coverage=52.899; evalue=2.8e-11 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | xla:446800 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.466; coverage=52.899; evalue=3.42e-12 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | xtr:394553 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.466; coverage=52.899; evalue=3.28e-12 | UniProtKB/Swiss-Prot DAT 2026 current_release |