Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_006550 |
|---|---|
| Query reference | OH1004 |
| Location | Chr02:13257277-13259659 (+) |
| Description | |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_006550 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 13 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g03070 |
Binds to conventional NLS motifs and mediates nuclear protein import across the nuclear envelope (By similarity). | No verified direct reference in this release |
At3g12140 |
Probably involved in the regulation of chromatin states (Probable). | |
At5g13020 |
Probably involved in the regulation of chromatin states (Probable). | No verified direct reference in this release |
At2g44440 |
Probably involved in the regulation of chromatin states (Probable). |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os01g0158000 |
Binds specifically and directly to substrates containing either a simple or bipartite NLS motif. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006357 | regulation of transcription by RNA polymerase II | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=66.667; coverage=27.74; evalue=4.86e-24; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006607 | NLS-bearing protein import into nucleus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.391; coverage=78.767; evalue=6.94e-68; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010228 | vegetative to reproductive phase transition of meristem | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=74.667; coverage=25.685; evalue=1.13e-24; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050832 | defense response to fungus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=74.667; coverage=25.685; evalue=1.13e-24; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.391; coverage=78.767; evalue=6.94e-68; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005635 | nuclear envelope | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.391; coverage=78.767; evalue=6.94e-68; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.391; coverage=78.767; evalue=6.94e-68; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042564 | NLS-dependent protein nuclear import complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.391; coverage=78.767; evalue=6.94e-68; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048471 | perinuclear region of cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=53.043; coverage=78.767; evalue=1.34e-55; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003682 | chromatin binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=74.667; coverage=25.685; evalue=1.13e-24; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008139 | nuclear localization sequence binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.391; coverage=78.767; evalue=6.94e-68; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031491 | nucleosome binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=66.667; coverage=27.74; evalue=4.86e-24; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061608 | nuclear import signal receptor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.391; coverage=78.767; evalue=6.94e-68; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G44440 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=70.149; coverage=22.945; evalue=5.81e-20 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G12140 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=74.667; coverage=25.685; evalue=1.13e-24 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G03070 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.391; coverage=78.767; evalue=6.94e-68 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G13020 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=66.667; coverage=27.74; evalue=4.86e-24 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os01g0158000 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=53.043; coverage=78.767; evalue=1.34e-55 | UniProtKB/Swiss-Prot DAT 2026 current_release |