RubberDandelionOmics 橡胶草多组学网站
更多
转录组数据查询 注释 橡胶合成 转录因子预测 靶基因 蛋白关联网络 重测序 工具 下载
ZH EN

本页使用教程

基因注释

展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。

示例 TkA01G624900 LXL04_000258 文献示例 LXL04_039733 TkAUNG001940

查询结果

下载当前结果

基因 IDLXL04_005936
当前查询版本OH1004
位置Chr01:175909794-175911965 (+)
描述Similar to RHM1: Trifunctional UDP-glucose 4%2C6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3%2C5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 (Arabidopsis thaliana OX%3D3702)
注释来源组装GCA_047496595.1_OSU_TarKok_2.0

功能注释来源：OH1004 · LXL04_005936 · GCA_047496595.1_OSU_TarKok_2.0。

当前查询返回来自 OH1004 注释条目的 27 条 GO 注释和 4 条 KEGG 基因交叉引用；只下载当前查询结果，不据此推断 KEGG 通路成员。

拟南芥 / 水稻参考基因与文献

文献对应拟南芥或水稻参考基因；橡胶草的功能关联来自当前参考组装的蛋白序列比对。

下载当前基因文献

拟南芥

参考基因 ID可能功能对应论文 / DOI
At1g78570 参与 UDP-β-L-鼠李糖生物合成的三功能酶，该糖是初级细胞壁组分鼠李半乳聚糖 I (RG-I) 和鼠李半乳聚糖 II (RG-II) 的前体。
Functional analysis of Arabidopsis thaliana RHM2/MUM4, a multidomain protein involved in UDP-D-glucose to UDP-L-rhamnose conversion.2007 · DOI: 10.1074/jbc.m610196200
Comprehensive flavonol profiling and transcriptome coexpression analysis leading to decoding gene-metabolite correlations in Arabidopsis.2008 · DOI: 10.1105/tpc.108.058040
Overexpression of a cytosol-localized rhamnose biosynthesis protein encoded by Arabidopsis RHM1 gene increases rhamnose content in cell wall.2009 · DOI: 10.1016/j.plaphy.2008.10.011
At3g14790 参与 UDP-β-L-鼠李糖生物合成的三功能酶，该糖是初级细胞壁组分鼠李半乳聚糖 I (RG-I) 和鼠李半乳聚糖 II (RG-II) 的前体。
Functional analysis of Arabidopsis thaliana RHM2/MUM4, a multidomain protein involved in UDP-D-glucose to UDP-L-rhamnose conversion.2007 · DOI: 10.1074/jbc.m610196200
At1g53500 参与 UDP-β-L-鼠李糖生物合成的三功能酶，是主要细胞壁成分鼠李半乳糖醛酸 I 和鼠李半乳糖醛酸 II 的前体。
RHM2 is involved in mucilage pectin synthesis and is required for the development of the seed coat in Arabidopsis.2004 · DOI: 10.1104/pp.103.034314
Functional analysis of Arabidopsis thaliana RHM2/MUM4, a multidomain protein involved in UDP-D-glucose to UDP-L-rhamnose conversion.2007 · DOI: 10.1074/jbc.m610196200
At1g63000 参与 dTDP-β-L-鼠李糖生物合成的双功能酶。 暂无已核实直接文献

水稻

当前来源表未检出该物种的同源命中。

GO / KEGG

以下 GO/KEGG 注释源自上述 OH1004 注释条目，保留原始同源转移证据及覆盖度；其来源物种范围与拟南芥/水稻直接比对表不同。

类型ID名称命名空间证据来源
GOGO:0009225nucleotide-sugar metabolic process生物过程Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=48.824; 覆盖度=52.067; E 值=8.09e-106; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010192mucilage biosynthetic process生物过程Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=72.576; 覆盖度=101.072; E 值=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010214seed coat development生物过程Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=72.576; 覆盖度=101.072; E 值=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010253UDP-rhamnose biosynthetic process生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.523; 覆盖度=101.991; E 值=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010315auxin export across the plasma membrane生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.523; 覆盖度=101.991; E 值=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0019300rhamnose biosynthetic process生物过程Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=48.824; 覆盖度=52.067; E 值=8.09e-106; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0019305dTDP-rhamnose biosynthetic process生物过程Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=72.028; 覆盖度=43.798; E 值=7.37e-160; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0030154cell differentiation生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.523; 覆盖度=101.991; E 值=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042127regulation of cell population proliferation生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.523; 覆盖度=101.991; E 值=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0051555flavonol biosynthetic process生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.523; 覆盖度=101.991; E 值=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0071555cell wall organization生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.523; 覆盖度=101.991; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleus细胞组分Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=72.576; 覆盖度=101.072; E 值=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005739mitochondrion细胞组分Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.523; 覆盖度=101.991; E 值=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005829cytosol细胞组分Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.523; 覆盖度=101.991; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005886plasma membrane细胞组分Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=72.028; 覆盖度=43.798; E 值=7.37e-160; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009506plasmodesma细胞组分Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.523; 覆盖度=101.991; E 值=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009507chloroplast细胞组分Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.523; 覆盖度=101.991; E 值=0.0; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010494cytoplasmic stress granule细胞组分Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.523; 覆盖度=101.991; E 值=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0008460dTDP-glucose 4,6-dehydratase activity分子功能Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.523; 覆盖度=101.991; E 值=0.0; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0008830dTDP-4-dehydrorhamnose 3,5-epimerase activity分子功能Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=72.028; 覆盖度=43.798; E 值=7.37e-160; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0008831dTDP-4-dehydrorhamnose reductase activity分子功能Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=72.028; 覆盖度=43.798; E 值=7.37e-160; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010280UDP-L-rhamnose synthase activity分子功能Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.523; 覆盖度=101.991; E 值=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010489UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity分子功能Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=72.576; 覆盖度=101.072; E 值=0.0; UniProt GO evidence=TAS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010490UDP-4-keto-rhamnose-4-keto-reductase activity分子功能Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=72.576; 覆盖度=101.072; E 值=0.0; UniProt GO evidence=TAS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016491oxidoreductase activity分子功能Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.523; 覆盖度=101.991; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016853isomerase activity分子功能Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.523; 覆盖度=101.991; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0050377UDP-glucose 4,6-dehydratase activity分子功能Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.523; 覆盖度=101.991; E 值=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G53500KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed 同源转移; 命中排序=3; 一致性=72.576; 覆盖度=101.072; E 值=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G63000KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed 同源转移; 命中排序=4; 一致性=72.028; 覆盖度=43.798; E 值=7.37e-160UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G78570KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.523; 覆盖度=101.991; E 值=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G14790KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed 同源转移; 命中排序=2; 一致性=72.727; 覆盖度=101.072; E 值=0.0UniProtKB/Swiss-Prot DAT 2026 current_release