Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_005392 |
|---|---|
| Query reference | OH1004 |
| Location | Chr01:162562881-162575365 (+) |
| Description | Similar to DELLA1: DELLA protein 1 (Medicago truncatula OX%3D3880) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_005392 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 18 GO annotations and 2 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g17490 |
Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. | No verified direct reference in this release |
At1g66350 |
Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. |
Arabidopsis RGL1 encodes a negative regulator of gibberellin responses.2002 · DOI: 10.1105/tpc.010325 Gibberellin regulates Arabidopsis seed germination via RGL2, a GAI/RGA-like gene whose expression is up-regulated following imbibition.2002 · DOI: 10.1101/gad.969002
|
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006351 | DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=29.664; coverage=32.57; evalue=5.52e-31; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006355 | regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=29.664; coverage=32.57; evalue=5.52e-31; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006357 | regulation of transcription by RNA polymerase II | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=28.467; coverage=27.291; evalue=6.29e-31; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009610 | response to symbiotic fungus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=28.467; coverage=27.291; evalue=6.29e-31; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009737 | response to abscisic acid | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=29.664; coverage=32.57; evalue=5.52e-31; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009739 | response to gibberellin | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=29.664; coverage=32.57; evalue=5.52e-31; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009740 | gibberellic acid mediated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=29.664; coverage=32.57; evalue=5.52e-31; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009938 | negative regulation of gibberellic acid mediated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=29.664; coverage=32.57; evalue=5.52e-31; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010187 | negative regulation of seed germination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=29.664; coverage=32.57; evalue=5.52e-31; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010431 | seed maturation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=29.664; coverage=32.57; evalue=5.52e-31; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016036 | cellular response to phosphate starvation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=28.467; coverage=27.291; evalue=6.29e-31; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0036377 | arbuscular mycorrhizal association | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=28.467; coverage=27.291; evalue=6.29e-31; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045944 | positive regulation of transcription by RNA polymerase II | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=28.467; coverage=27.291; evalue=6.29e-31; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000033 | regulation of seed dormancy process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=29.664; coverage=32.57; evalue=5.52e-31; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000693 | positive regulation of seed maturation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=29.664; coverage=32.57; evalue=5.52e-31; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=29.664; coverage=32.57; evalue=5.52e-31; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=29.664; coverage=32.57; evalue=5.52e-31; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043565 | sequence-specific DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=29.664; coverage=32.57; evalue=5.52e-31; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT5G17490 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=29.664; coverage=32.57; evalue=5.52e-31 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mtr:25489240 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=28.467; coverage=27.291; evalue=6.29e-31 | UniProtKB/Swiss-Prot DAT 2026 current_release |