Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_005279 |
|---|---|
| Query reference | OH1004 |
| Location | Chr01:159625992-159628369 (-) |
| Description | Similar to TCX3: Protein tesmin/TSO1-like CXC 3 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_005279 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 12 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g22760 |
Plays a role in development of both male and female reproductive tissues. | No verified direct reference in this release |
At4g14770 |
Plays a role in development of both male and female reproductive tissues. | No verified direct reference in this release |
At3g22780 |
Probable floral-specific cell division component, required for proper organ formation in flowers. |
Regulation of meristem organization and cell division by TSO1, an Arabidopsis gene with cysteine-rich repeats.2000 · DOI: 10.1242/dev.127.10.2207 TSO1 is a novel protein that modulates cytokinesis and cell expansion in Arabidopsis.2000 · DOI: 10.1242/dev.127.10.2219
|
At3g04850 |
Plays a role in development of both male and female reproductive tissues. | No verified direct reference in this release |
At5g25790 |
Plays a role in development of both male and female reproductive tissues. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006355 | regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=41.83; coverage=40.584; evalue=4.07e-28; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009934 | regulation of meristem structural organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.252; coverage=42.175; evalue=1.74e-27; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010235 | guard mother cell cytokinesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.252; coverage=42.175; evalue=1.74e-27; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010375 | stomatal complex patterning | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.177; coverage=62.865; evalue=2.05e-28; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010440 | stomatal lineage progression | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.177; coverage=62.865; evalue=2.05e-28; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010481 | epidermal cell division | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.252; coverage=42.175; evalue=1.74e-27; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048444 | floral organ morphogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.252; coverage=42.175; evalue=1.74e-27; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051302 | regulation of cell division | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.252; coverage=42.175; evalue=1.74e-27; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.177; coverage=62.865; evalue=2.05e-28; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000976 | transcription cis-regulatory region binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.177; coverage=62.865; evalue=2.05e-28; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.177; coverage=62.865; evalue=2.05e-28; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046872 | metal ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.177; coverage=62.865; evalue=2.05e-28; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G04850 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=36.735; coverage=38.992; evalue=2.91e-23 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G22760 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.177; coverage=62.865; evalue=2.05e-28 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G22780 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.252; coverage=42.175; evalue=1.74e-27 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G14770 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=41.83; coverage=40.584; evalue=4.07e-28 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G25790 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.962; coverage=42.175; evalue=2.74e-18 | UniProtKB/Swiss-Prot DAT 2026 current_release |