RubberDandelionOmics 橡胶草多组学网站
更多
转录组数据查询 注释 橡胶合成 转录因子预测 靶基因 蛋白关联网络 重测序 工具 下载
ZH EN

本页使用教程

基因注释

展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。

示例 TkA01G624900 LXL04_000258 文献示例 LXL04_039733 TkAUNG001940

查询结果

下载当前结果

基因 IDLXL04_005052
当前查询版本OH1004
位置Chr01:153853226-153856190 (-)
描述Similar to PCFS4: Polyadenylation and cleavage factor homolog 4 (Arabidopsis thaliana OX%3D3702)
注释来源组装GCA_047496595.1_OSU_TarKok_2.0

功能注释来源：OH1004 · LXL04_005052 · GCA_047496595.1_OSU_TarKok_2.0。

当前查询返回来自 OH1004 注释条目的 15 条 GO 注释和 4 条 KEGG 基因交叉引用；只下载当前查询结果，不据此推断 KEGG 通路成员。

拟南芥 / 水稻参考基因与文献

文献对应拟南芥或水稻参考基因；橡胶草的功能关联来自当前参考组装的蛋白序列比对。

下载当前基因文献

拟南芥

参考基因 ID可能功能对应论文 / DOI
At4g04885 通过调节 FCA 前 mRNA 替代加工来抑制 FLC 介导的开花抑制，从而促进开花。
Arabidopsis PCFS4, a homologue of yeast polyadenylation factor Pcf11p, regulates FCA alternative processing and promotes flowering time.2008 · DOI: 10.1111/j.1365-313x.2008.03455.x
Ratio-based analysis of differential mRNA processing and expression of a polyadenylation factor mutant pcfs4 using arabidopsis tiling microarray.2011 · DOI: 10.1371/journal.pone.0014719
At1g66500 多腺苷酸化和切割因子同源物 1。 暂无已核实直接文献
At5g43620 多腺苷酸化与切割因子同源物 5。 暂无已核实直接文献

水稻

当前来源表未检出该物种的同源命中。

GO / KEGG

以下 GO/KEGG 注释源自上述 OH1004 注释条目，保留原始同源转移证据及覆盖度；其来源物种范围与拟南芥/水稻直接比对表不同。

类型ID名称命名空间证据来源
GOGO:0006369termination of RNA polymerase II transcription生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=41.424; 覆盖度=37.775; E 值=5.37e-54; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006397mRNA processing生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=41.424; 覆盖度=37.775; E 值=5.37e-54; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009908flower development生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=41.424; 覆盖度=37.775; E 值=5.37e-54; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009911positive regulation of flower development生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=41.424; 覆盖度=37.775; E 值=5.37e-54; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031124mRNA 3'-end processing生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=41.424; 覆盖度=37.775; E 值=5.37e-54; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031440regulation of mRNA 3'-end processing生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=41.424; 覆盖度=37.775; E 值=5.37e-54; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0180010co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway生物过程Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=37.419; 覆盖度=18.949; E 值=1.02e-21; UniProt GO evidence=NAS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleus细胞组分Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=41.424; 覆盖度=37.775; E 值=5.37e-54; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005654nucleoplasm细胞组分Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=37.419; 覆盖度=18.949; E 值=9.48e-22; UniProt GO evidence=ISO:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasm细胞组分Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=41.424; 覆盖度=37.775; E 值=5.37e-54; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005739mitochondrion细胞组分Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=37.419; 覆盖度=18.949; E 值=9.48e-22; UniProt GO evidence=ISO:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005849mRNA cleavage factor complex细胞组分Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=41.424; 覆盖度=37.775; E 值=5.37e-54; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000993RNA polymerase II complex binding分子功能Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=41.424; 覆盖度=37.775; E 值=5.37e-54; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003729mRNA binding分子功能Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=41.424; 覆盖度=37.775; E 值=5.37e-54; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0008270zinc ion binding分子功能Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=41.424; 覆盖度=37.775; E 值=5.37e-54; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G66500KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed 同源转移; 命中排序=5; 一致性=34.32; 覆盖度=20.66; E 值=2.44e-20UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G04885KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed 同源转移; 命中排序=1; 一致性=41.424; 覆盖度=37.775; E 值=5.37e-54UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGhsa:51585KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed 同源转移; 命中排序=4; 一致性=37.419; 覆盖度=18.949; E 值=1.02e-21UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGmmu:74737KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed 同源转移; 命中排序=3; 一致性=37.419; 覆盖度=18.949; E 值=9.48e-22UniProtKB/Swiss-Prot DAT 2026 current_release