基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_004310 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr01:132016466-132021172 (-) |
| 描述 | Similar to HUB2: E3 ubiquitin-protein ligase BRE1-like 2 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_004310 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 22 条 GO 注释和 4 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
UniProt: Q9C895 |
E3 泛素蛋白连接酶,将 H2B 单泛素化形成 H2BK143ub1。 | 暂无已核实直接文献 |
UniProt: Q8RXD6 |
E3 泛素蛋白连接酶,将 H2B 单泛素化形成 H2BK143ub1。 | 暂无已核实直接文献 |
水稻
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
Os10g0565600 |
E3 泛素蛋白连接酶,可单泛素化 H2B 形成 H2BK143ub1。 | |
UniProt: A2ZAC2 |
E3 泛素蛋白连接酶,将 H2B 单泛素化形成 H2BK143ub1。 | 暂无已核实直接文献 |
Os04g0550400 |
E3 泛素蛋白连接酶,可单泛素化 H2B 形成 H2BK143ub1。 |
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006325 | chromatin organization | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=53.044; 覆盖度=96.28; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006513 | protein monoubiquitination | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=32.376; 覆盖度=102.029; E 值=7.36e-127; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009908 | flower development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=53.044; 覆盖度=96.28; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009965 | leaf morphogenesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.75; 覆盖度=102.931; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010162 | seed dormancy process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.75; 覆盖度=102.931; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010228 | vegetative to reproductive phase transition of meristem | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.75; 覆盖度=102.931; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010389 | regulation of G2/M transition of mitotic cell cycle | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=32.376; 覆盖度=102.029; E 值=7.36e-127; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016567 | protein ubiquitination | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.75; 覆盖度=102.931; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-UniPathway | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045087 | innate immune response | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.75; 覆盖度=102.931; E 值=0.0; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050832 | defense response to fungus | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=32.376; 覆盖度=102.029; E 值=7.36e-127; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051301 | cell division | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=32.376; 覆盖度=102.029; E 值=7.36e-127; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051781 | positive regulation of cell division | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=32.376; 覆盖度=102.029; E 值=7.36e-127; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.75; 覆盖度=102.931; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=32.376; 覆盖度=102.029; E 值=7.36e-127; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033503 | HULC complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.75; 覆盖度=102.931; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004842 | ubiquitin-protein transferase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=32.376; 覆盖度=102.029; E 值=7.36e-127; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.75; 覆盖度=102.931; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042802 | identical protein binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=32.376; 覆盖度=102.029; E 值=7.36e-127; UniProt GO evidence=IPI:IntAct | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042803 | protein homodimerization activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.75; 覆盖度=102.931; E 值=0.0; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061630 | ubiquitin protein ligase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.75; 覆盖度=102.931; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140852 | histone ubiquitin ligase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.75; 覆盖度=102.931; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140936 | histone H2B deubiquitinase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.75; 覆盖度=102.931; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G55250 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.75; 覆盖度=102.931; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G44950 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=32.376; 覆盖度=102.029; E 值=7.36e-127 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os04g0550400 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=31.159; 覆盖度=100.225; E 值=5.19e-111 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os10g0565600 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=53.044; 覆盖度=96.28; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release |