Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_004068 |
|---|---|
| Query reference | OH1004 |
| Location | Chr01:124028272-124035331 (+) |
| Description | Similar to RAD50: DNA repair protein RAD50 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_004068 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 53 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At2g31970 |
Component of the MRN complex, which plays a central role in double-strand break (DSB) repair, DNA recombination, maintenance of telomere integrity and meiosis. |
Disruption of the Arabidopsis RAD50 gene leads to plant sterility and MMS sensitivity.2001 · DOI: 10.1046/j.1365-313x.2001.00928.x RAD50 function is essential for telomere maintenance in Arabidopsis.2001 · DOI: 10.1073/pnas.98.4.1711
|
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000019 | regulation of mitotic recombination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.578; coverage=103.561; evalue=4.65e-169; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000722 | telomere maintenance via recombination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.121; coverage=100.0; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000723 | telomere maintenance | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.121; coverage=100.0; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000724 | double-strand break repair via homologous recombination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.578; coverage=103.561; evalue=4.65e-169; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000729 | DNA double-strand break processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.578; coverage=103.561; evalue=4.65e-169; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006281 | DNA repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.578; coverage=103.561; evalue=4.65e-169; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006302 | double-strand break repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.121; coverage=100.0; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006310 | DNA recombination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.578; coverage=103.561; evalue=4.65e-169; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006312 | mitotic recombination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.121; coverage=100.0; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006974 | DNA damage response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.578; coverage=103.561; evalue=4.65e-169; UniProt GO evidence=ISO:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007004 | telomere maintenance via telomerase | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.121; coverage=100.0; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007131 | reciprocal meiotic recombination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.837; coverage=103.182; evalue=9.81e-169; UniProt GO evidence=TAS:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007346 | regulation of mitotic cell cycle | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.578; coverage=103.561; evalue=4.65e-169; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016233 | telomere capping | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.121; coverage=100.0; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031860 | telomeric 3' overhang formation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.578; coverage=103.561; evalue=4.65e-169; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032206 | positive regulation of telomere maintenance | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.578; coverage=103.561; evalue=4.65e-169; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035825 | homologous recombination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.578; coverage=103.561; evalue=4.65e-169; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0044752 | response to human chorionic gonadotropin | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.837; coverage=103.182; evalue=9.81e-169; UniProt GO evidence=IEP:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0044818 | mitotic G2/M transition checkpoint | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.578; coverage=103.561; evalue=4.65e-169; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046597 | host-mediated suppression of symbiont invasion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.578; coverage=103.561; evalue=4.65e-169; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051276 | chromosome organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.578; coverage=103.561; evalue=4.65e-169; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051310 | metaphase chromosome alignment | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=31.016; coverage=101.364; evalue=4.7e-168; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0062176 | R-loop processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.578; coverage=103.561; evalue=4.65e-169; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070192 | chromosome organization involved in meiotic cell cycle | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.121; coverage=100.0; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0110025 | DNA strand resection involved in replication fork processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.578; coverage=103.561; evalue=4.65e-169; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1904354 | negative regulation of telomere capping | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.578; coverage=103.561; evalue=4.65e-169; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000781 | positive regulation of double-strand break repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.578; coverage=103.561; evalue=4.65e-169; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000781 | chromosome, telomeric region | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.578; coverage=103.561; evalue=4.65e-169; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000785 | chromatin | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.578; coverage=103.561; evalue=4.65e-169; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000794 | condensed nuclear chromosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.121; coverage=100.0; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.121; coverage=100.0; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.578; coverage=103.561; evalue=4.65e-169; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.121; coverage=100.0; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=30.706; coverage=101.894; evalue=1.11e-168; UniProt GO evidence=HDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016234 | inclusion body | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.578; coverage=103.561; evalue=4.65e-169; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016604 | nuclear body | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.578; coverage=103.561; evalue=4.65e-169; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030870 | Mre11 complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.121; coverage=100.0; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035861 | site of double-strand break | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.578; coverage=103.561; evalue=4.65e-169; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048471 | perinuclear region of cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.578; coverage=103.561; evalue=4.65e-169; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070533 | BRCA1-C complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.578; coverage=103.561; evalue=4.65e-169; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0098687 | chromosomal region | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.578; coverage=103.561; evalue=4.65e-169; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.578; coverage=103.561; evalue=4.65e-169; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003690 | double-stranded DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.578; coverage=103.561; evalue=4.65e-169; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003691 | double-stranded telomeric DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.121; coverage=100.0; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.121; coverage=100.0; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016887 | ATP hydrolysis activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.121; coverage=100.0; evalue=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030674 | protein-macromolecule adaptor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.578; coverage=103.561; evalue=4.65e-169; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042802 | identical protein binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.578; coverage=103.561; evalue=4.65e-169; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043047 | single-stranded telomeric DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.121; coverage=100.0; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043539 | protein serine/threonine kinase activator activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.578; coverage=103.561; evalue=4.65e-169; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0044877 | protein-containing complex binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.578; coverage=103.561; evalue=4.65e-169; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046872 | metal ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.121; coverage=100.0; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051880 | G-quadruplex DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.121; coverage=100.0; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G31970 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=62.121; coverage=100.0; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:10111 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=30.706; coverage=101.894; evalue=1.11e-168 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | rno:64012 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.837; coverage=103.182; evalue=9.81e-169 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | xla:495064 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=31.016; coverage=101.364; evalue=4.7e-168 | UniProtKB/Swiss-Prot DAT 2026 current_release |