基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_003849 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr01:109279027-109280377 (+) |
| 描述 | Similar to CDKD-3: Cyclin-dependent kinase D-3 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_003849 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 16 条 GO 注释和 4 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At1g18040 |
可能与细胞周期蛋白CYCH1-1形成稳定复合物,磷酸化人类CDK2及RNA聚合酶II大亚基的C端结构域(CTD)。 | 暂无已核实直接文献 |
At1g73690 |
细胞周期蛋白dependent kinase D-1。 | 暂无已核实直接文献 |
At1g66750 |
与细胞周期蛋白 CYCH1-1 形成稳定复合物,可磷酸化人类 CDK2 及 RNA 聚合酶 II 大亚基的 C 端结构域 (CTD)。 | 暂无已核实直接文献 |
水稻
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
Os05g0392300 |
CDK 激活激酶,可能控制 G1/S 期进程。 | 暂无已核实直接文献 |
UniProt: A2Y4B6 |
细胞周期蛋白dependent kinase D-1。 | 暂无已核实直接文献 |
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006367 | transcription initiation at RNA polymerase II promoter | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.626; 覆盖度=43.612; E 值=1.66e-33; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030154 | cell differentiation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=62.626; 覆盖度=43.612; E 值=2.81e-33; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045944 | positive regulation of transcription by RNA polymerase II | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=62.626; 覆盖度=43.612; E 值=3.24e-33; UniProt GO evidence=IEA:TreeGrafter | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048578 | positive regulation of long-day photoperiodism, flowering | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=60.0; 覆盖度=44.053; E 值=2.32e-31; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051301 | cell division | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.626; 覆盖度=43.612; E 值=1.66e-33; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051726 | regulation of cell cycle | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.626; 覆盖度=43.612; E 值=1.66e-33; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.626; 覆盖度=43.612; E 值=1.66e-33; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.626; 覆盖度=43.612; E 值=1.66e-33; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070985 | transcription factor TFIIK complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.626; 覆盖度=43.612; E 值=1.66e-33; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004672 | protein kinase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.626; 覆盖度=43.612; E 值=1.66e-33; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004674 | protein serine/threonine kinase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=60.0; 覆盖度=44.053; E 值=2.32e-31; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004693 | cyclin-dependent protein serine/threonine kinase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.626; 覆盖度=43.612; E 值=1.66e-33; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.626; 覆盖度=43.612; E 值=1.66e-33; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008353 | RNA polymerase II CTD heptapeptide repeat kinase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.626; 覆盖度=43.612; E 值=1.66e-33; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043539 | protein serine/threonine kinase activator activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=60.0; 覆盖度=44.053; E 值=2.32e-31; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0106310 | protein serine kinase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.626; 覆盖度=43.612; E 值=1.66e-33; UniProt GO evidence=IEA:RHEA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G18040 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.626; 覆盖度=43.612; E 值=1.66e-33 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G66750 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=60.0; 覆盖度=44.053; E 值=2.32e-31 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G73690 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=62.626; 覆盖度=43.612; E 值=2.81e-33 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os05g0392300 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=62.626; 覆盖度=43.612; E 值=3.24e-33 | UniProtKB/Swiss-Prot DAT 2026 current_release |