基因注释

展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。

示例 TkA01G624900 LXL04_000258 文献示例 LXL04_039733 TkAUNG001940

查询结果

基因 ID	`LXL04_003350`
当前查询版本	OH1004
位置	Chr01:75739684-75743908 (-)
描述	Similar to JMJ25: Lysine-specific demethylase JMJ25 (Arabidopsis thaliana OX%3D3702)
注释来源组装	GCA_047496595.1_OSU_TarKok_2.0

功能注释来源：OH1004 · LXL04_003350 · GCA_047496595.1_OSU_TarKok_2.0。

当前查询返回来自 OH1004 注释条目的 27 条 GO 注释和 4 条 KEGG 基因交叉引用；只下载当前查询结果，不据此推断 KEGG 通路成员。

拟南芥 / 水稻参考基因与文献

文献对应拟南芥或水稻参考基因；橡胶草的功能关联来自当前参考组装的蛋白序列比对。

下载当前基因文献

拟南芥

参考基因 ID	可能功能	对应论文 / DOI
`At1g62310`	可能作为组蛋白H3赖氨酸去甲基化酶，参与基因表达调控。	暂无已核实直接文献
`At1g11950`	可能作为组蛋白H3赖氨酸去甲基化酶，参与基因表达调控。	暂无已核实直接文献
`At4g00990`	组蛋白去甲基酶，可去甲基化组蛋白H3的'Lys-9'(H3K9me)，对H3K9me1和H3K9me2具有特异性活性。	JMJ27, an Arabidopsis H3K9 histone demethylase, modulates defense against Pseudomonas syringae and flowering time.2017 · DOI: 10.1111/tpj.13623 JMJ27-mediated histone H3K9 demethylation positively regulates drought-stress responses in Arabidopsis.2021 · DOI: 10.1111/nph.17593
`At3g07610`	组蛋白去甲基酶，去甲基化组蛋白 H3 的 'Lys-9' (H3K9me)，特别针对 H3K9me2 和 H3K9me1。	Control of genic DNA methylation by a jmjC domain-containing protein in Arabidopsis thaliana.2008 · DOI: 10.1126/science.1150987 An Arabidopsis jmjC domain protein protects transcribed genes from DNA methylation at CHG sites.2009 · DOI: 10.1038/emboj.2009.59 Autocatalytic differentiation of epigenetic modifications within the Arabidopsis genome.2010 · DOI: 10.1038/emboj.2010.227 DNA methylation in an intron of the IBM1 histone demethylase gene stabilizes chromatin modification patterns.2012 · DOI: 10.1038/emboj.2012.141 IBM1, a JmjC domain-containing histone demethylase, is involved in the regulation of RNA-directed DNA methylation through the epigenetic control of RDR2 and DCL3 expression in Arabidopsis.2012 · DOI: 10.1093/nar/gks647 SHOOT GROWTH1 maintains Arabidopsis epigenomes by regulating IBM1.2014 · DOI: 10.1371/journal.pone.0084687 Demethylation of ERECTA receptor genes by IBM1 histone demethylase affects stomatal development.2016 · DOI: 10.1242/dev.129932 Contrasting epigenetic control of transgenes and endogenous genes promotes post-transcriptional transgene silencing in Arabidopsis.2021 · DOI: 10.1038/s41467-021-22995-3 The arabidopsis GyraseB3 contributes to transposon silencing by promoting histone deacetylation.2025 · DOI: 10.1093/nar/gkaf985
`At1g09060`	可能结合组蛋白 H3，但因无法结合 Fe²⁺ 而丧失去甲基化酶活性。	JMJ24 binds to RDR2 and is required for the basal level transcription of silenced loci in Arabidopsis.2015 · DOI: 10.1111/tpj.12924 JMJ24 targets CHROMOMETHYLASE3 for proteasomal degradation in Arabidopsis.2016 · DOI: 10.1101/gad.274647.115 A JUMONJI Protein with E3 Ligase and Histone H3 Binding Activities Affects Transposon Silencing in Arabidopsis.2016 · DOI: 10.1104/pp.15.01688

水稻

当前来源表未检出该物种的同源命中。

GO / KEGG

以下 GO/KEGG 注释源自上述 OH1004 注释条目，保留原始同源转移证据及覆盖度；其来源物种范围与拟南芥/水稻直接比对表不同。

类型	ID	名称	命名空间	证据	来源
GO	GO:0006351	DNA-templated transcription	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=46.747; 覆盖度=74.02; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006357	regulation of transcription by RNA polymerase II	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=46.747; 覆盖度=74.02; E 值=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009414	response to water deprivation	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=42.956; 覆盖度=81.075; E 值=6.87e-175; UniProt GO evidence=IEP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009555	pollen development	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=53.348; 覆盖度=50.168; E 值=7.5e-145; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009617	response to bacterium	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=42.956; 覆盖度=81.075; E 值=6.87e-175; UniProt GO evidence=IEP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009908	flower development	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=53.348; 覆盖度=50.168; E 值=7.5e-145; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010440	stomatal lineage progression	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=53.348; 覆盖度=50.168; E 值=7.5e-145; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010468	regulation of gene expression	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=53.348; 覆盖度=50.168; E 值=7.5e-145; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0040029	epigenetic regulation of gene expression	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=46.747; 覆盖度=74.02; E 值=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0042742	defense response to bacterium	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=42.956; 覆盖度=81.075; E 值=6.87e-175; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0048366	leaf development	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=53.348; 覆盖度=50.168; E 值=7.5e-145; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0080188	gene silencing by siRNA-directed DNA methylation	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=53.348; 覆盖度=50.168; E 值=7.5e-145; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0090333	regulation of stomatal closure	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=42.956; 覆盖度=81.075; E 值=6.87e-175; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1902584	positive regulation of response to water deprivation	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=42.956; 覆盖度=81.075; E 值=6.87e-175; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:2000028	regulation of photoperiodism, flowering	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=42.956; 覆盖度=81.075; E 值=6.87e-175; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:2000039	regulation of trichome morphogenesis	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=46.747; 覆盖度=74.02; E 值=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0000118	histone deacetylase complex	细胞组分	Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=46.747; 覆盖度=74.02; E 值=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0000785	chromatin	细胞组分	Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=46.747; 覆盖度=74.02; E 值=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	细胞组分	Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=46.747; 覆盖度=74.02; E 值=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005737	cytoplasm	细胞组分	Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=42.956; 覆盖度=81.075; E 值=6.87e-175; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0048188	Set1C/COMPASS complex	细胞组分	Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=45.934; 覆盖度=74.356; E 值=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003712	transcription coregulator activity	分子功能	Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=46.747; 覆盖度=74.02; E 值=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0008270	zinc ion binding	分子功能	Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=46.747; 覆盖度=74.02; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0016491	oxidoreductase activity	分子功能	Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=46.747; 覆盖度=74.02; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0031490	chromatin DNA binding	分子功能	Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=46.747; 覆盖度=74.02; E 值=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0032454	histone H3K9 demethylase activity	分子功能	Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=46.747; 覆盖度=74.02; E 值=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0140683	histone H3K9me/H3K9me2 demethylase activity	分子功能	Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=42.956; 覆盖度=81.075; E 值=6.87e-175; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT1G11950	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=45.934; 覆盖度=74.356; E 值=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT1G62310	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=46.747; 覆盖度=74.02; E 值=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT3G07610	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=53.348; 覆盖度=50.168; E 值=7.5e-145	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT4G00990	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=42.956; 覆盖度=81.075; E 值=6.87e-175	UniProtKB/Swiss-Prot DAT 2026 current_release