Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_002074 |
|---|---|
| Query reference | OH1004 |
| Location | Chr01:41377317-41378429 (-) |
| Description | Similar to NUP50A: Nuclear pore complex protein NUP50A (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_002074 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 20 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g52380 |
Probably involved in nucleocytoplasmic transport via its interactions with importins and Ran, rather than by forming part of the nuclear pore complex (NPC) scaffolding. | No verified direct reference in this release |
At3g15970 |
Probably involved in nucleocytoplasmic transport via its interactions with importins and Ran, rather than by forming part of the nuclear pore complex (NPC) scaffolding. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006406 | mRNA export from nucleus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.328; coverage=36.216; evalue=9.55e-13; UniProt GO evidence=IMP:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006606 | protein import into nucleus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.328; coverage=36.216; evalue=9.55e-13; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006607 | NLS-bearing protein import into nucleus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.328; coverage=36.216; evalue=9.55e-13; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006611 | protein export from nucleus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.297; coverage=120.0; evalue=8.52e-105; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006913 | nucleocytoplasmic transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.328; coverage=36.216; evalue=9.55e-13; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007281 | germ cell development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.328; coverage=36.216; evalue=9.55e-13; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010628 | positive regulation of gene expression | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.328; coverage=36.216; evalue=9.55e-13; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035626 | juvenile hormone mediated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.328; coverage=36.216; evalue=9.55e-13; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051028 | mRNA transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.297; coverage=120.0; evalue=8.52e-105; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051168 | nuclear export | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.328; coverage=36.216; evalue=9.55e-13; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051292 | nuclear pore complex assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.328; coverage=36.216; evalue=9.55e-13; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1900182 | positive regulation of protein localization to nucleus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.328; coverage=36.216; evalue=9.55e-13; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.297; coverage=120.0; evalue=8.52e-105; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005635 | nuclear envelope | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.328; coverage=36.216; evalue=9.55e-13; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005642 | annulate lamellae | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.328; coverage=36.216; evalue=9.55e-13; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005643 | nuclear pore | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.297; coverage=120.0; evalue=8.52e-105; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.297; coverage=120.0; evalue=8.52e-105; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.328; coverage=36.216; evalue=9.55e-13; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019789 | SUMO transferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.328; coverage=36.216; evalue=9.55e-13; UniProt GO evidence=ISS:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030674 | protein-macromolecule adaptor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.328; coverage=36.216; evalue=9.55e-13; UniProt GO evidence=IPI:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G52380 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.297; coverage=120.0; evalue=8.52e-105 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G15970 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.799; coverage=75.135; evalue=4.04e-77 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dme:Dmel_CG11856 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.328; coverage=36.216; evalue=9.55e-13 | UniProtKB/Swiss-Prot DAT 2026 current_release |