基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_001820 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr01:34244773-34248324 (-) |
| 描述 | Similar to ADA2: Transcriptional adapter ADA2 (Oryza sativa subsp. japonica OX%3D39947) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_001820 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 33 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At3g07740 |
对某些酸性激活结构域的功能是必需的,这些结构域可从远端位点激活转录。 | 暂无已核实直接文献 |
At4g16420 |
对某些酸性激活结构域的功能是必需的,这些结构域可从远端位点激活转录。 |
Disruption mutations of ADA2b and GCN5 transcriptional adaptor genes dramatically affect Arabidopsis growth, development, and gene expression.2003 · DOI: 10.1105/tpc.007922
|
水稻
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
Os03g0750800 |
对某些酸性激活结构域的功能必需,这些结构域能够从远端位置激活转录(通过相似性)。 |
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0000183 | rDNA heterochromatin formation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=26.877; 覆盖度=91.667; E 值=4.25e-51; UniProt GO evidence=IMP:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006325 | chromatin organization | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=26.877; 覆盖度=91.667; E 值=4.25e-51; UniProt GO evidence=IDA:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006338 | chromatin remodeling | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=58.541; 覆盖度=101.812; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006351 | DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=58.541; 覆盖度=101.812; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006357 | regulation of transcription by RNA polymerase II | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=58.541; 覆盖度=101.812; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009409 | response to cold | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=53.996; 覆盖度=101.993; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009631 | cold acclimation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=53.707; 覆盖度=100.181; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009733 | response to auxin | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=53.707; 覆盖度=100.181; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009735 | response to cytokinin | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=53.707; 覆盖度=100.181; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010520 | regulation of reciprocal meiotic recombination | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=44.262; 覆盖度=22.101; E 值=7.74e-35; UniProt GO evidence=IEA:EnsemblFungi | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010811 | positive regulation of cell-substrate adhesion | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=44.262; 覆盖度=22.101; E 值=7.74e-35; UniProt GO evidence=IMP:CGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030447 | filamentous growth | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=44.262; 覆盖度=22.101; E 值=7.74e-35; UniProt GO evidence=IMP:CGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031509 | subtelomeric heterochromatin formation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=26.877; 覆盖度=91.667; E 值=4.25e-51; UniProt GO evidence=IMP:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042127 | regulation of cell population proliferation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=53.707; 覆盖度=100.181; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043709 | cell adhesion involved in single-species biofilm formation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=44.262; 覆盖度=22.101; E 值=7.74e-35; UniProt GO evidence=IMP:CGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0044114 | development of symbiont in host | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=44.262; 覆盖度=22.101; E 值=7.74e-35; UniProt GO evidence=IMP:CGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0044182 | filamentous growth of a population of unicellular organisms | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=44.262; 覆盖度=22.101; E 值=7.74e-35; UniProt GO evidence=IMP:CGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071466 | cellular response to xenobiotic stimulus | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=44.262; 覆盖度=22.101; E 值=7.74e-35; UniProt GO evidence=IMP:CGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071470 | cellular response to osmotic stress | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=44.262; 覆盖度=22.101; E 值=7.74e-35; UniProt GO evidence=IEA:EnsemblFungi | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1900189 | positive regulation of cell adhesion involved in single-species biofilm formation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=44.262; 覆盖度=22.101; E 值=7.74e-35; UniProt GO evidence=IMP:CGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990414 | replication-born double-strand break repair via sister chromatid exchange | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=26.877; 覆盖度=91.667; E 值=4.25e-51; UniProt GO evidence=IMP:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000124 | SAGA complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=26.877; 覆盖度=91.667; E 值=4.25e-51; UniProt GO evidence=IDA:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000781 | chromosome, telomeric region | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=26.877; 覆盖度=91.667; E 值=4.25e-51; UniProt GO evidence=IEA:GOC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=58.541; 覆盖度=101.812; E 值=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046695 | SLIK (SAGA-like) complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=26.877; 覆盖度=91.667; E 值=4.25e-51; UniProt GO evidence=IDA:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070461 | SAGA-type complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=26.877; 覆盖度=91.667; E 值=4.25e-51; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140671 | ADA complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=26.877; 覆盖度=91.667; E 值=4.25e-51; UniProt GO evidence=IDA:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0001786 | phosphatidylserine binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=26.877; 覆盖度=91.667; E 值=4.25e-51; UniProt GO evidence=IDA:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=58.541; 覆盖度=101.812; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003682 | chromatin binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=58.541; 覆盖度=101.812; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003713 | transcription coactivator activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=58.541; 覆盖度=101.812; E 值=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=58.541; 覆盖度=101.812; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043565 | sequence-specific DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=44.262; 覆盖度=22.101; E 值=7.74e-35; UniProt GO evidence=IDA:CGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G07740 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=53.996; 覆盖度=101.993; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G16420 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=53.707; 覆盖度=100.181; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | cal:CAALFM_C110860CA | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=44.262; 覆盖度=22.101; E 值=7.74e-35 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os03g0750800 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=58.541; 覆盖度=101.812; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | sce:YDR448W | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=26.877; 覆盖度=91.667; E 值=4.25e-51 | UniProtKB/Swiss-Prot DAT 2026 current_release |