Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_001274 |
|---|---|
| Query reference | OH1004 |
| Location | Chr01:23309115-23311362 (-) |
| Description | Similar to SYP43: Syntaxin-43 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_001274 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 33 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g05710 |
Contributes to the regulation of secretory and vacuolar transport pathways in the post-Golgi network, and to the maintenance of the Golgi apparatus and trans-Golgi network (TGN) morphologies. | |
At5g26980 |
Contributes to the regulation of secretory and vacuolar transport pathways in the post-Golgi network, and to the maintenance of the Golgi apparatus and trans-Golgi network (TGN) morphologies. | |
At4g02195 |
Contributes to the regulation of secretory and vacuolar transport pathways in the post-Golgi network, and to the maintenance of the Golgi apparatus and trans-Golgi network (TGN) morphologies. |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006886 | intracellular protein transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.471; coverage=104.062; evalue=1.09e-170; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006896 | Golgi to vacuole transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.471; coverage=104.062; evalue=1.09e-170; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006906 | vesicle fusion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.471; coverage=104.062; evalue=1.09e-170; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007030 | Golgi organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.471; coverage=104.062; evalue=1.09e-170; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007034 | vacuolar transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.471; coverage=104.062; evalue=1.09e-170; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009306 | protein secretion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.471; coverage=104.062; evalue=1.09e-170; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009658 | chloroplast organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.471; coverage=104.062; evalue=1.09e-170; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009863 | salicylic acid mediated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.471; coverage=104.062; evalue=1.09e-170; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032456 | endocytic recycling | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=36.207; coverage=72.5; evalue=3.23e-40; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042147 | retrograde transport, endosome to Golgi | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=36.207; coverage=72.5; evalue=3.23e-40; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043001 | Golgi to plasma membrane protein transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.471; coverage=104.062; evalue=1.09e-170; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048278 | vesicle docking | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.471; coverage=104.062; evalue=1.09e-170; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050832 | defense response to fungus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.471; coverage=104.062; evalue=1.09e-170; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061025 | membrane fusion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.471; coverage=104.062; evalue=1.09e-170; UniProt GO evidence=TAS:TIGR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0098629 | trans-Golgi network membrane organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.471; coverage=104.062; evalue=1.09e-170; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1900150 | regulation of defense response to fungus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=62.848; coverage=100.938; evalue=2.28e-142; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000139 | Golgi membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=36.207; coverage=72.5; evalue=3.23e-40; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=36.207; coverage=72.5; evalue=3.23e-40; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005768 | endosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.471; coverage=104.062; evalue=1.09e-170; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005794 | Golgi apparatus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.471; coverage=104.062; evalue=1.09e-170; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005802 | trans-Golgi network | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.471; coverage=104.062; evalue=1.09e-170; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=36.207; coverage=72.5; evalue=3.23e-40; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005925 | focal adhesion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=36.207; coverage=72.5; evalue=3.23e-40; UniProt GO evidence=HDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0012505 | endomembrane system | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.471; coverage=104.062; evalue=1.09e-170; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=36.207; coverage=72.5; evalue=3.23e-40; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030140 | trans-Golgi network transport vesicle | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=69.846; coverage=101.562; evalue=1.76e-163; UniProt GO evidence=TAS:TIGR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031201 | SNARE complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.471; coverage=104.062; evalue=1.09e-170; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031985 | Golgi cisterna | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=36.207; coverage=72.5; evalue=3.23e-40; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032588 | trans-Golgi network membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=36.207; coverage=72.5; evalue=3.23e-40; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043231 | intracellular membrane-bounded organelle | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=36.207; coverage=72.5; evalue=3.23e-40; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048471 | perinuclear region of cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=36.207; coverage=72.5; evalue=3.23e-40; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000149 | SNARE binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.471; coverage=104.062; evalue=1.09e-170; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005484 | SNAP receptor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.471; coverage=104.062; evalue=1.09e-170; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G05710 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.471; coverage=104.062; evalue=1.09e-170 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G02195 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=62.848; coverage=100.938; evalue=2.28e-142 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G26980 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=69.846; coverage=101.562; evalue=1.76e-163 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:8675 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=36.207; coverage=72.5; evalue=3.23e-40 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:228960 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=35.897; coverage=73.125; evalue=2.39e-39 | UniProtKB/Swiss-Prot DAT 2026 current_release |