基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_001217 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr01:22110557-22112444 (+) |
| 描述 | Similar to ACL5: Thermospermine synthase ACAULIS5 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_001217 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 11 条 GO 注释和 3 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At5g19530 |
需要通过调节木质部元素的寿命来实现正确的木质部规格。 |
ACAULIS5, an Arabidopsis gene required for stem elongation, encodes a spermine synthase.2000 · DOI: 10.1093/emboj/19.16.4248
|
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006596 | polyamine biosynthetic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.976; 覆盖度=99.11; E 值=4.32e-159; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008295 | spermidine biosynthetic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=44.681; 覆盖度=83.68; E 值=3.88e-66; UniProt GO evidence=IEA:UniProtKB-UniRule | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009926 | auxin polar transport | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.976; 覆盖度=99.11; E 值=4.32e-159; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010087 | phloem or xylem histogenesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.976; 覆盖度=99.11; E 值=4.32e-159; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048759 | xylem vessel member cell differentiation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.976; 覆盖度=99.11; E 值=4.32e-159; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.976; 覆盖度=99.11; E 值=4.32e-159; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.976; 覆盖度=99.11; E 值=4.32e-159; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004766 | spermidine synthase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=44.681; 覆盖度=83.68; E 值=3.88e-66; UniProt GO evidence=IEA:UniProtKB-UniRule | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010487 | thermospermine synthase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.976; 覆盖度=99.11; E 值=4.32e-159; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016768 | spermine synthase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.976; 覆盖度=99.11; E 值=4.32e-159; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050314 | sym-norspermidine synthase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=44.681; 覆盖度=83.68; E 值=3.88e-66; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ape:APE_0767.1 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=39.13; 覆盖度=88.724; E 值=9.38e-65 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G19530 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.976; 覆盖度=99.11; E 值=4.32e-159 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hbu:Hbut_0383 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=44.681; 覆盖度=83.68; E 值=3.88e-66 | UniProtKB/Swiss-Prot DAT 2026 current_release |