Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_000152 |
|---|---|
| Query reference | OH1004 |
| Location | Chr01:3225076-3226281 (+) |
| Description | Similar to HAKAI: E3 ubiquitin-protein ligase HAKAI homolog (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_000152 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 28 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g01160 |
Probable E3 ubiquitin-protein ligase which is a subunit of the N6-methyltransferase complex, a multiprotein complex that mediates N6-methyladenosine (m6A) methylation at the 5'-[AG]GAC-3' consensus sites of some mRNAs. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000381 | regulation of alternative mRNA splicing, via spliceosome | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.692; coverage=29.799; evalue=1.45e-13; UniProt GO evidence=IMP:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0001510 | RNA methylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.059; coverage=107.163; evalue=4.23e-93; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006397 | mRNA processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.059; coverage=107.163; evalue=4.23e-93; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007015 | actin filament organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.692; coverage=29.799; evalue=1.45e-13; UniProt GO evidence=IMP:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007162 | negative regulation of cell adhesion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.298; coverage=26.934; evalue=5.95e-14; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007548 | sex differentiation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.692; coverage=29.799; evalue=1.45e-13; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016567 | protein ubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.059; coverage=107.163; evalue=4.23e-93; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030155 | regulation of cell adhesion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.059; coverage=107.163; evalue=4.23e-93; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030237 | female sex determination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.692; coverage=29.799; evalue=1.45e-13; UniProt GO evidence=IMP:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030335 | positive regulation of cell migration | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.298; coverage=26.934; evalue=5.95e-14; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035282 | segmentation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.692; coverage=29.799; evalue=1.45e-13; UniProt GO evidence=IMP:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045807 | positive regulation of endocytosis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.298; coverage=26.934; evalue=5.95e-14; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0098609 | cell-cell adhesion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=34.234; coverage=31.805; evalue=1.68e-13; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000151 | ubiquitin ligase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=34.234; coverage=31.805; evalue=1.68e-13; UniProt GO evidence=IC:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005576 | extracellular region | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.059; coverage=107.163; evalue=4.23e-93; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.298; coverage=26.934; evalue=5.95e-14; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.298; coverage=26.934; evalue=5.95e-14; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.692; coverage=29.799; evalue=1.45e-13; UniProt GO evidence=IDA:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.692; coverage=29.799; evalue=1.45e-13; UniProt GO evidence=IDA:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016607 | nuclear speck | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.059; coverage=107.163; evalue=4.23e-93; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031410 | cytoplasmic vesicle | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.692; coverage=29.799; evalue=1.45e-13; UniProt GO evidence=IDA:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0036396 | RNA N6-methyladenosine methyltransferase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.059; coverage=107.163; evalue=4.23e-93; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048471 | perinuclear region of cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.692; coverage=29.799; evalue=1.45e-13; UniProt GO evidence=IDA:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004842 | ubiquitin-protein transferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.298; coverage=26.934; evalue=5.95e-14; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.059; coverage=107.163; evalue=4.23e-93; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042802 | identical protein binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=34.234; coverage=31.805; evalue=1.68e-13; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045296 | cadherin binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.692; coverage=29.799; evalue=1.45e-13; UniProt GO evidence=IPI:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061630 | ubiquitin protein ligase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.059; coverage=107.163; evalue=4.23e-93; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT5G01160 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.059; coverage=107.163; evalue=4.23e-93 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dme:Dmel_CG10263 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.692; coverage=29.799; evalue=1.45e-13 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | gga:417701 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.298; coverage=26.934; evalue=5.95e-14 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:79872 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=34.234; coverage=31.805; evalue=1.68e-13 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mcf:101866734 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.234; coverage=31.805; evalue=1.38e-13 | UniProtKB/Swiss-Prot DAT 2026 current_release |