基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkAUNG067460 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | ChrUn:19587404-19594072 (+) |
| 描述 | Similar to ROS3: Protein REPRESSOR OF SILENCING 3 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_003007 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 12 条 GO 注释和 4 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At5g58130 |
需要的 RNA 结合蛋白,用于 DNA 去甲基化并缓解 siRNA 介导的转录基因沉默(TGS),可能通过引导 ROS1 实现。 |
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006364 | rRNA processing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=38.144; 覆盖度=15.876; E 值=1.97e-11; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031047 | regulatory ncRNA-mediated gene silencing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=49.042; 覆盖度=42.717; E 值=6.39e-67; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042254 | ribosome biogenesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=36.735; 覆盖度=16.039; E 值=2.11e-08; UniProt GO evidence=ISS:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0060966 | regulation of gene silencing by regulatory ncRNA | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=49.042; 覆盖度=42.717; E 值=6.39e-67; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902570 | protein localization to nucleolus | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=38.144; 覆盖度=15.876; E 值=1.97e-11; UniProt GO evidence=IMP:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990830 | cellular response to leukemia inhibitory factor | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=36.842; 覆盖度=15.548; E 值=2.41e-11; UniProt GO evidence=IEP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=49.042; 覆盖度=42.717; E 值=6.39e-67; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=49.042; 覆盖度=42.717; E 值=6.39e-67; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005694 | chromosome | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=36.842; 覆盖度=15.548; E 值=2.41e-11; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005730 | nucleolus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=49.042; 覆盖度=42.717; E 值=6.39e-67; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=49.042; 覆盖度=42.717; E 值=6.39e-67; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003727 | single-stranded RNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=49.042; 覆盖度=42.717; E 值=6.39e-67; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT5G58130 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=49.042; 覆盖度=42.717; E 值=6.39e-67 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:55035 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=38.144; 覆盖度=15.876; E 值=1.97e-11 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:70930 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=36.842; 覆盖度=15.548; E 值=2.41e-11 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | spo:2541269 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=36.735; 覆盖度=16.039; E 值=2.11e-08 | UniProtKB/Swiss-Prot DAT 2026 current_release |