RubberDandelionOmics 橡胶草多组学网站
更多
转录组数据查询 注释 橡胶合成 转录因子预测 靶基因 蛋白关联网络 重测序 工具 下载
ZH EN

本页使用教程

基因注释

展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。

示例 TkA01G624900 LXL04_000258 文献示例 LXL04_039733 TkAUNG001940

查询结果

下载当前结果

基因 IDTkA03G105280
当前查询版本TK1151
位置Chr03:26933552-26940023 (+)
描述Similar to LIG6: DNA ligase 6 (Arabidopsis thaliana OX%3D3702)
注释来源组装GCA_047496595.1_OSU_TarKok_2.0

功能注释来源：OH1004 · LXL04_007038 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释；下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。

当前查询返回来自 OH1004 注释条目的 27 条 GO 注释和 5 条 KEGG 基因交叉引用；只下载当前查询结果，不据此推断 KEGG 通路成员。

拟南芥 / 水稻参考基因与文献

文献对应拟南芥或水稻参考基因；橡胶草的功能关联来自当前参考组装的蛋白序列比对。

下载当前基因文献

拟南芥

参考基因 ID可能功能对应论文 / DOI
At1g66730 DNA 连接酶，在 DNA 复制、DNA 重组和 DNA 修复过程中密封双链 DNA 中的切口（可能）。
A plant DNA ligase is an important determinant of seed longevity.2010 · DOI: 10.1111/j.1365-313x.2010.04285.x
Agrobacterium T-DNA integration into the plant genome can occur without the activity of key non-homologous end-joining proteins.2015 · DOI: 10.1111/tpj.12779
At1g08130 必需蛋白质。
DNA ligase 1 deficient plants display severe growth defects and delayed repair of both DNA single and double strand breaks.2009 · DOI: 10.1186/1471-2229-9-79
DNA LIGASE I exerts a maternal effect on seed development in Arabidopsis thaliana.2010 · DOI: 10.1242/dev.041020

水稻

当前来源表未检出该物种的同源命中。

GO / KEGG

以下 GO/KEGG 注释源自上述 OH1004 注释条目，保留原始同源转移证据及覆盖度；其来源物种范围与拟南芥/水稻直接比对表不同。

类型ID名称命名空间证据来源
GOGO:0000012single strand break repair生物过程Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=40.125; 覆盖度=47.365; E 值=4.02e-170; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0002237response to molecule of bacterial origin生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.656; 覆盖度=106.31; E 值=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006260DNA replication生物过程Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=40.125; 覆盖度=47.365; E 值=4.02e-170; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006273lagging strand elongation生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.656; 覆盖度=106.31; E 值=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006281DNA repair生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.656; 覆盖度=106.31; E 值=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006302double-strand break repair生物过程Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=40.125; 覆盖度=47.365; E 值=4.02e-170; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006303double-strand break repair via nonhomologous end joining生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.656; 覆盖度=106.31; E 值=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006310DNA recombination生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.656; 覆盖度=106.31; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006979response to oxidative stress生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.656; 覆盖度=106.31; E 值=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009409response to cold生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.656; 覆盖度=106.31; E 值=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009845seed germination生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.656; 覆盖度=106.31; E 值=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010225response to UV-C生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.656; 覆盖度=106.31; E 值=0.0; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0015074DNA integration生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.656; 覆盖度=106.31; E 值=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048316seed development生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.656; 覆盖度=106.31; E 值=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0051301cell division生物过程Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=40.125; 覆盖度=47.365; E 值=4.02e-170; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0071897DNA biosynthetic process生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.656; 覆盖度=106.31; E 值=0.0; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:1903461Okazaki fragment processing involved in mitotic DNA replication生物过程Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=39.785; 覆盖度=48.33; E 值=6.6e-163; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:1904975response to bleomycin生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.656; 覆盖度=106.31; E 值=0.0; UniProt GO evidence=IEP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:2000685positive regulation of cellular response to X-ray生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.656; 覆盖度=106.31; E 值=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleus细胞组分Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.656; 覆盖度=106.31; E 值=0.0; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005730nucleolus细胞组分Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=40.125; 覆盖度=47.365; E 值=4.02e-170; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasm细胞组分Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=38.65; 覆盖度=48.404; E 值=1.24e-156; UniProt GO evidence=IDA:FlyBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005739mitochondrion细胞组分Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=40.125; 覆盖度=47.365; E 值=4.02e-170; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003677DNA binding分子功能Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.656; 覆盖度=106.31; E 值=0.0; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003910DNA ligase (ATP) activity分子功能Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.656; 覆盖度=106.31; E 值=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005524ATP binding分子功能Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.656; 覆盖度=106.31; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0046872metal ion binding分子功能Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.656; 覆盖度=106.31; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G08130KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed 同源转移; 命中排序=2; 一致性=40.125; 覆盖度=47.365; E 值=4.02e-170UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G66730KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.656; 覆盖度=106.31; E 值=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGddi:DDB_G0274493KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed 同源转移; 命中排序=3; 一致性=39.785; 覆盖度=48.33; E 值=6.6e-163UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdme:Dmel_CG5602KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed 同源转移; 命中排序=5; 一致性=38.65; 覆盖度=48.404; E 值=1.24e-156UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGxla:397978KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed 同源转移; 命中排序=4; 一致性=39.538; 覆盖度=48.255; E 值=1.46e-157UniProtKB/Swiss-Prot DAT 2026 current_release