基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA03G097210 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr03:24657221-24661524 (-) |
| 描述 | Similar to CCD8B: Carotenoid cleavage dioxygenase 8 homolog B%2C chloroplastic (Oryza sativa subsp. japonica OX%3D39947) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_005248 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 23 条 GO 注释和 6 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At4g32810 |
可能通过裂解 CCD7 产生的 C₂₇ 类胡萝卜素衍生物,参与独脚金内酯生物合成。 |
MAX4 and RMS1 are orthologous dioxygenase-like genes that regulate shoot branching in Arabidopsis and pea.2003 · DOI: 10.1101/gad.256603
|
水稻
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
Os01g0746400 |
通过切割CCD7产生的C(27) 9-顺式-10′-阿朴-β-胡萝卜素醛,参与独脚金内酯生物合成。 | 暂无已核实直接文献 |
Os01g0566500 |
可能参与独脚金内酯生物合成。 | 暂无已核实直接文献 |
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0001523 | retinoid metabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=27.863; 覆盖度=94.756; E 值=2.13e-49; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009635 | response to herbicide | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=63.774; 覆盖度=95.841; E 值=0.0; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009733 | response to auxin | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=63.774; 覆盖度=95.841; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009926 | auxin polar transport | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=63.774; 覆盖度=95.841; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009965 | leaf morphogenesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=63.774; 覆盖度=95.841; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010223 | secondary shoot formation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=77.938; 覆盖度=87.703; E 值=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016121 | carotene catabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=77.938; 覆盖度=87.703; E 值=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016124 | xanthophyll catabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=63.774; 覆盖度=95.841; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042572 | retinol metabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=29.459; 覆盖度=90.235; E 值=7.72e-57; UniProt GO evidence=IEA:UniProtKB-UniPathway | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042574 | retinal metabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=29.459; 覆盖度=90.235; E 值=7.72e-57; UniProt GO evidence=IEA:TreeGrafter | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1901601 | strigolactone biosynthetic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=77.938; 覆盖度=87.703; E 值=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1901810 | beta-carotene metabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=27.863; 覆盖度=94.756; E 值=2.13e-49; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=27.863; 覆盖度=94.756; E 值=2.13e-49; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=77.938; 覆盖度=87.703; E 值=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009570 | chloroplast stroma | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=63.774; 覆盖度=95.841; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003834 | beta-carotene 15,15'-dioxygenase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=29.459; 覆盖度=90.235; E 值=7.72e-57; UniProt GO evidence=IEA:TreeGrafter | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004497 | monooxygenase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=29.459; 覆盖度=90.235; E 值=7.72e-57; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010436 | carotenoid dioxygenase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=77.938; 覆盖度=87.703; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=77.938; 覆盖度=87.703; E 值=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046872 | metal ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=77.938; 覆盖度=87.703; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0102251 | all-trans-beta-apo-10'-carotenal cleavage oxygenase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=77.938; 覆盖度=87.703; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0102396 | 9-cis-10'-apo-beta-carotenal cleavage oxygenase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=77.938; 覆盖度=87.703; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0106422 | carotenoid isomerooxygenase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=29.459; 覆盖度=90.235; E 值=7.72e-57; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ag:CAO85888 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=29.459; 覆盖度=90.235; E 值=7.72e-57 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G32810 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=63.774; 覆盖度=95.841; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os01g0566500 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=63.86; 覆盖度=88.065; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os01g0746400 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=77.938; 覆盖度=87.703; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:63857 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=27.863; 覆盖度=94.756; E 值=2.13e-49 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | osa:4327933 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=63.86; 覆盖度=88.065; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release |