基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA02G150360 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr02:38714311-38715450 (-) |
| 描述 | Similar to MYB63: Transcription factor MYB63 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_016363 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 24 条 GO 注释和 4 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At1g79180 |
转录激活因子,结合 DNA 上的 AC 顺式元件 5'-ACCTACC-3'、5'-ACCAACC-3' 和 5'-ACCTAAC-3' 的启动子,并在 SND1 介导的次级细胞壁形成过程中特异性激活木质素生物合成基因。 | |
At1g56160 |
参与金属离子稳态,包括通过调节NAS4和NAS2基因表达获得铁离子(Fe)。 |
Expression differences for genes involved in lignin, glutathione and sulphate metabolism in response to cadmium in Arabidopsis thaliana and the related Zn/Cd-hyperaccumulator Thlaspi caerulescens.2008 · DOI: 10.1111/j.1365-3040.2007.01764.x MYB72 is required in early signaling steps of rhizobacteria-induced systemic resistance in Arabidopsis.2008 · DOI: 10.1104/pp.107.113829
|
At1g16490 |
转录激活因子,结合 DNA 上的 AC 顺式元件 5'-ACCTACC-3'、5'-ACCAACC-3' 和 5'-ACCTAAC-3' 的启动子,并在 SND1 介导的次级细胞壁形成过程中特异性激活木质素生物合成基因。 | |
At2g31180 |
转录激活剂,通过影响 CBF 基因的表达来调节耐冻性。 |
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0002237 | response to molecule of bacterial origin | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=81.034; 覆盖度=45.669; E 值=1.33e-65; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006351 | DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=80.172; 覆盖度=45.669; E 值=7.25e-67; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009409 | response to cold | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=59.509; 覆盖度=64.173; E 值=2.05e-62; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009411 | response to UV | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=80.172; 覆盖度=45.669; E 值=7.25e-67; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009416 | response to light stimulus | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=79.31; 覆盖度=45.669; E 值=9.23e-66; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009809 | lignin biosynthetic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=80.172; 覆盖度=45.669; E 值=7.25e-67; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009866 | induced systemic resistance, ethylene mediated signaling pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=81.034; 覆盖度=45.669; E 值=1.33e-65; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010043 | response to zinc ion | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=81.034; 覆盖度=45.669; E 值=1.33e-65; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010447 | response to acidic pH | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=81.034; 覆盖度=45.669; E 值=1.33e-65; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010468 | regulation of gene expression | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=81.034; 覆盖度=45.669; E 值=1.33e-65; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019748 | secondary metabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=81.034; 覆盖度=45.669; E 值=1.33e-65; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045893 | positive regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=80.172; 覆盖度=45.669; E 值=7.25e-67; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050826 | response to freezing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=59.509; 覆盖度=64.173; E 值=2.05e-62; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051365 | cellular response to potassium ion starvation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=81.034; 覆盖度=45.669; E 值=1.33e-65; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0098849 | cellular detoxification of cadmium ion | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=81.034; 覆盖度=45.669; E 值=1.33e-65; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1901141 | regulation of lignin biosynthetic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=52.525; 覆盖度=77.953; E 值=2.01e-62; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990359 | stress response to zinc ion | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=81.034; 覆盖度=45.669; E 值=1.33e-65; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990532 | stress response to nickel ion | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=81.034; 覆盖度=45.669; E 值=1.33e-65; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990641 | response to iron ion starvation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=81.034; 覆盖度=45.669; E 值=1.33e-65; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000652 | regulation of secondary cell wall biogenesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=80.172; 覆盖度=45.669; E 值=7.25e-67; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=80.172; 覆盖度=45.669; E 值=7.25e-67; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000976 | transcription cis-regulatory region binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=80.172; 覆盖度=45.669; E 值=7.25e-67; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=81.034; 覆盖度=45.669; E 值=1.33e-65; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=80.172; 覆盖度=45.669; E 值=7.25e-67; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G16490 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=79.31; 覆盖度=45.669; E 值=9.23e-66 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G56160 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=81.034; 覆盖度=45.669; E 值=1.33e-65 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G79180 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=80.172; 覆盖度=45.669; E 值=7.25e-67 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G31180 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=59.509; 覆盖度=64.173; E 值=2.05e-62 | UniProtKB/Swiss-Prot DAT 2026 current_release |