基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA01G615220 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr01:155177683-155181570 (-) |
| 描述 | Similar to At2g41900: Zinc finger CCCH domain-containing protein 30 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_000385 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 14 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At2g41900 |
含锌指 CCCH 结构域蛋白 30。 | 暂无已核实直接文献 |
At5g12850 |
含锌指CCCH结构域的蛋白56。 | 暂无已核实直接文献 |
At5g58620 |
含锌指CCCH结构域的蛋白66。 | 暂无已核实直接文献 |
水稻
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
Os03g0698800 |
含锌指CCCH结构域的蛋白质24。 | 暂无已核实直接文献 |
Os07g0568300 |
含锌指CCCH结构域的蛋白 50。 | 暂无已核实直接文献 |
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006355 | regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=60.876; 覆盖度=105.357; E 值=0.0; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006412 | translation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=44.038; 覆盖度=93.601; E 值=3.57e-154; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010468 | regulation of gene expression | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=56.101; 覆盖度=106.101; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080090 | regulation of primary metabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=56.101; 覆盖度=106.101; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902074 | response to salt | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=60.876; 覆盖度=105.357; E 值=0.0; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000932 | P-body | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=44.038; 覆盖度=93.601; E 值=3.57e-154; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=60.876; 覆盖度=105.357; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=60.876; 覆盖度=105.357; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=44.038; 覆盖度=93.601; E 值=3.57e-154; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010494 | cytoplasmic stress granule | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=44.038; 覆盖度=93.601; E 值=3.57e-154; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=60.876; 覆盖度=105.357; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=60.876; 覆盖度=105.357; E 值=0.0; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=44.038; 覆盖度=93.601; E 值=3.57e-154; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=60.876; 覆盖度=105.357; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G41900 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=60.876; 覆盖度=105.357; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G12850 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=50.281; 覆盖度=105.952; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G58620 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=44.038; 覆盖度=93.601; E 值=3.57e-154 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os03g0698800 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=56.101; 覆盖度=106.101; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os12g0515500 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=45.322; 覆盖度=101.786; E 值=5.67e-163 | UniProtKB/Swiss-Prot DAT 2026 current_release |