基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA01G095270 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr01:24083412-24089909 (-) |
| 描述 | Similar to RGTB1: Geranylgeranyl transferase type-2 subunit beta 1 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_004939 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 20 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At5g12210 |
可能催化 Rab 蛋白的香叶基香叶基化。 |
Arabidopsis RAB geranylgeranyl transferase beta-subunit mutant is constitutively photomorphogenic, and has shoot growth and gravitropic defects.2010 · DOI: 10.1111/j.1365-313x.2010.04172.x
|
At5g02790 |
催化谷胱甘肽依赖的 S-谷胱甘肽基槲皮素还原为槲皮素。 | 暂无已核实直接文献 |
At5g02780 |
催化谷胱甘肽依赖的 S-谷胱甘肽基槲皮素还原为槲皮素。 | 暂无已核实直接文献 |
At3g55040 |
催化谷胱甘肽依赖的 S-谷胱甘肽基槲皮素还原为槲皮素。 | 暂无已核实直接文献 |
At3g12070 |
可能催化 Rab 蛋白的香叶基香叶基化。 |
水稻
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
UniProt: A1XBB7 |
IN2-1 蛋白同源物 B。 | 暂无已核实直接文献 |
Os03g0283100 |
IN2-1 蛋白同源物 B。 | 暂无已核实直接文献 |
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=74.598; 覆盖度=99.679; E 值=2.37e-176; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009553 | embryo sac development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=74.598; 覆盖度=99.679; E 值=2.37e-176; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009555 | pollen development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=74.598; 覆盖度=99.679; E 值=2.37e-176; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009793 | embryo development ending in seed dormancy | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=74.598; 覆盖度=99.679; E 值=2.37e-176; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009960 | endosperm development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=74.598; 覆盖度=99.679; E 值=2.37e-176; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010183 | pollen tube guidance | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=74.598; 覆盖度=99.679; E 值=2.37e-176; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010214 | seed coat development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=74.598; 覆盖度=99.679; E 值=2.37e-176; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010315 | auxin export across the plasma membrane | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=74.598; 覆盖度=99.679; E 值=2.37e-176; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0018344 | protein geranylgeranylation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=74.598; 覆盖度=99.679; E 值=2.37e-176; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048316 | seed development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=74.598; 覆盖度=99.679; E 值=2.37e-176; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048364 | root development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=74.598; 覆盖度=99.679; E 值=2.37e-176; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140301 | pollen-stigma interaction | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=74.598; 覆盖度=99.679; E 值=2.37e-176; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140964 | intracellular auxin homeostasis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=74.598; 覆盖度=99.679; E 值=2.37e-176; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=57.516; 覆盖度=98.077; E 值=4.25e-136; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005968 | Rab-protein geranylgeranyltransferase complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=74.598; 覆盖度=99.679; E 值=2.37e-176; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004663 | Rab geranylgeranyltransferase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=74.598; 覆盖度=99.679; E 值=2.37e-176; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=57.516; 覆盖度=98.077; E 值=4.25e-136; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019840 | isoprenoid binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=57.516; 覆盖度=98.077; E 值=4.25e-136; UniProt GO evidence=IDA:CAFA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031267 | small GTPase binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=57.516; 覆盖度=98.077; E 值=4.25e-136; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046872 | metal ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=74.598; 覆盖度=99.679; E 值=2.37e-176; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G12070 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=73.077; 覆盖度=100.0; E 值=4.94e-172 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G12210 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=74.598; 覆盖度=99.679; E 值=2.37e-176 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | bta:533276 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=57.516; 覆盖度=98.077; E 值=1.31e-135 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:19352 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=57.19; 覆盖度=98.077; E 值=8.49e-136 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | rno:25533 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=57.516; 覆盖度=98.077; E 值=4.25e-136 | UniProtKB/Swiss-Prot DAT 2026 current_release |