基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA01G095000 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr01:24011512-24013356 (-) |
| 描述 | Similar to TOP6A: DNA topoisomerase 6 subunit A (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_004941 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 25 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At5g02820 |
DNA 拓扑异构酶 VI 的组成部分,参与染色质组织和内复制循环的推进。 | |
At3g13170 |
DNA核酸内切酶,特异性介导DNA切割,形成启动减数分裂重组的双链断裂(DSB)。 |
AtSPO11-1 is necessary for efficient meiotic recombination in plants.2001 · DOI: 10.1093/emboj/20.3.589 Arabidopsis SPO11-2 functions with SPO11-1 in meiotic recombination.2006 · DOI: 10.1111/j.1365-313x.2006.02867.x The catalytically active tyrosine residues of both SPO11-1 and SPO11-2 are required for meiotic double-strand break induction in Arabidopsis.2007 · DOI: 10.1105/tpc.107.054817
|
水稻
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
UniProt: A2XFC1 |
DNA 拓扑异构酶 VI 的组成部分,参与染色质组织和内复制循环的推进。 | 暂无已核实直接文献 |
Os03g0284800 |
DNA 拓扑异构酶 VI 的组成部分,参与染色质组织和内复制循环的推进。 | 暂无已核实直接文献 |
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0000706 | meiotic DNA double-strand break processing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=84.3; 覆盖度=98.337; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006265 | DNA topological change | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=84.3; 覆盖度=98.337; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-UniRule | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007129 | homologous chromosome pairing at meiosis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=37.11; 覆盖度=83.848; E 值=6.91e-79; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007130 | synaptonemal complex assembly | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=37.11; 覆盖度=83.848; E 值=6.91e-79; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007131 | reciprocal meiotic recombination | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=84.3; 覆盖度=98.337; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007141 | male meiosis I | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=37.11; 覆盖度=83.848; E 值=6.91e-79; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007283 | spermatogenesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=37.006; 覆盖度=84.086; E 值=9.29e-81; UniProt GO evidence=TAS:ProtInc | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007286 | spermatid development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=37.11; 覆盖度=83.848; E 值=6.91e-79; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007292 | female gamete generation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=37.006; 覆盖度=84.086; E 值=9.29e-81; UniProt GO evidence=TAS:ProtInc | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034502 | protein localization to chromosome | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=37.11; 覆盖度=83.848; E 值=6.91e-79; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042138 | meiotic DNA double-strand break formation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=84.3; 覆盖度=98.337; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045141 | meiotic telomere clustering | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=37.11; 覆盖度=83.848; E 值=6.91e-79; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090628 | plant epidermal cell fate specification | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=84.3; 覆盖度=98.337; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990918 | double-strand break repair involved in meiotic recombination | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=37.11; 覆盖度=83.848; E 值=6.91e-79; UniProt GO evidence=IGI:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000228 | nuclear chromosome | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=84.3; 覆盖度=98.337; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000781 | chromosome, telomeric region | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=37.006; 覆盖度=84.086; E 值=9.29e-81; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=84.3; 覆盖度=98.337; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=37.11; 覆盖度=83.848; E 值=6.91e-79; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009330 | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=84.3; 覆盖度=98.337; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-UniRule | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000287 | magnesium ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=84.3; 覆盖度=98.337; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-UniRule | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=84.3; 覆盖度=98.337; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003918 | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=84.3; 覆盖度=98.337; E 值=0.0; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=84.3; 覆盖度=98.337; E 值=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042802 | identical protein binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=84.3; 覆盖度=98.337; E 值=0.0; UniProt GO evidence=IPI:IntAct | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046872 | metal ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=37.006; 覆盖度=84.086; E 值=9.29e-81; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT5G02820 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=84.3; 覆盖度=98.337; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os03g0284800 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=69.014; 覆盖度=101.188; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:23626 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=37.006; 覆盖度=84.086; E 值=9.29e-81 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:26972 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=37.11; 覆盖度=83.848; E 值=6.91e-79 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | osa:4332468 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=69.014; 覆盖度=101.188; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release |