基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA01G038440 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr01:9933314-9935969 (-) |
| 描述 | Similar to SPO11-2: Meiotic recombination protein SPO11-2 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_005516 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 20 条 GO 注释和 4 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At1g63990 |
减数分裂重组特别需要的拓扑异构酶 6 复合物的组成部分。 |
Arabidopsis SPO11-2 functions with SPO11-1 in meiotic recombination.2006 · DOI: 10.1111/j.1365-313x.2006.02867.x The catalytically active tyrosine residues of both SPO11-1 and SPO11-2 are required for meiotic double-strand break induction in Arabidopsis.2007 · DOI: 10.1105/tpc.107.054817
|
At5g02820 |
DNA 拓扑异构酶 VI 的组成部分,参与染色质组织和内复制循环的推进。 |
水稻
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
UniProt: Q5ZPI9 |
需要进行减数分裂重组。 | 暂无已核实直接文献 |
Os08g0156900 |
需要进行减数分裂重组。 | 暂无已核实直接文献 |
UniProt: A2XFC1 |
DNA 拓扑异构酶 VI 的组成部分,参与染色质组织和内复制循环的推进。 | 暂无已核实直接文献 |
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0000706 | meiotic DNA double-strand break processing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=73.067; 覆盖度=98.425; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006265 | DNA topological change | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=34.451; 覆盖度=86.089; E 值=4.2e-58; UniProt GO evidence=IEA:UniProtKB-UniRule | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007059 | chromosome segregation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=73.067; 覆盖度=98.425; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007129 | homologous chromosome pairing at meiosis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=73.067; 覆盖度=98.425; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007131 | reciprocal meiotic recombination | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=73.067; 覆盖度=98.425; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009553 | embryo sac development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=73.067; 覆盖度=98.425; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009555 | pollen development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=73.067; 覆盖度=98.425; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042138 | meiotic DNA double-strand break formation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=73.067; 覆盖度=98.425; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048316 | seed development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=73.067; 覆盖度=98.425; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051026 | chiasma assembly | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=73.067; 覆盖度=98.425; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051321 | meiotic cell cycle | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=73.067; 覆盖度=98.425; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000228 | nuclear chromosome | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=73.067; 覆盖度=98.425; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=73.067; 覆盖度=98.425; E 值=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009330 | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=34.451; 覆盖度=86.089; E 值=4.2e-58; UniProt GO evidence=IEA:UniProtKB-UniRule | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000287 | magnesium ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=34.451; 覆盖度=86.089; E 值=4.2e-58; UniProt GO evidence=IEA:UniProtKB-UniRule | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=73.067; 覆盖度=98.425; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003918 | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=73.067; 覆盖度=98.425; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=73.067; 覆盖度=98.425; E 值=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016787 | hydrolase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=65.526; 覆盖度=99.738; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046872 | metal ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=73.067; 覆盖度=98.425; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G63990 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=73.067; 覆盖度=98.425; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os03g0284800 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=34.451; 覆盖度=86.089; E 值=4.2e-58 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os08g0156900 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=65.263; 覆盖度=99.738; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | osa:4332468 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=34.451; 覆盖度=86.089; E 值=4.2e-58 | UniProtKB/Swiss-Prot DAT 2026 current_release |