基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA01G003710 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr01:981956-984933 (-) |
| 描述 | Similar to At4g19190: Uncharacterized zinc finger CCHC domain-containing protein At4g19190 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_005971 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 18 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0000122 | negative regulation of transcription by RNA polymerase II | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=46.0; 覆盖度=10.73; E 值=8.37e-07; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000398 | mRNA splicing, via spliceosome | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=46.0; 覆盖度=10.73; E 值=8.37e-07; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006351 | DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=26.984; 覆盖度=40.558; E 值=3.32e-14; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006397 | mRNA processing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=26.984; 覆盖度=40.558; E 值=3.32e-14; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008380 | RNA splicing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=26.984; 覆盖度=40.558; E 值=3.32e-14; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045892 | negative regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=71.761; 覆盖度=64.592; E 值=1.3e-156; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045944 | positive regulation of transcription by RNA polymerase II | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=46.0; 覆盖度=10.73; E 值=1.41e-06; UniProt GO evidence=ISS:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=71.761; 覆盖度=64.592; E 值=1.3e-156; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005681 | spliceosomal complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=46.0; 覆盖度=10.73; E 值=1.41e-06; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005813 | centrosome | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=26.984; 覆盖度=40.558; E 值=3.32e-14; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016607 | nuclear speck | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=26.984; 覆盖度=40.558; E 值=3.32e-14; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032991 | protein-containing complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=26.984; 覆盖度=40.558; E 值=3.32e-14; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071006 | U2-type catalytic step 1 spliceosome | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=46.0; 覆盖度=10.73; E 值=1.41e-06; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003714 | transcription corepressor activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=71.761; 覆盖度=64.592; E 值=1.3e-156; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=71.761; 覆盖度=64.592; E 值=1.3e-156; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019901 | protein kinase binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=26.984; 覆盖度=40.558; E 值=3.32e-14; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042826 | histone deacetylase binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=26.984; 覆盖度=40.558; E 值=3.32e-14; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0044877 | protein-containing complex binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=26.984; 覆盖度=40.558; E 值=3.32e-14; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT4G19190 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=71.761; 覆盖度=64.592; E 值=1.3e-156 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | gga:426529 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=26.984; 覆盖度=40.558; E 值=3.32e-14 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:9541 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=46.0; 覆盖度=10.73; E 值=8.37e-07 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:66935 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=46.0; 覆盖度=10.73; E 值=1.41e-06 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | rno:362149 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=46.0; 覆盖度=10.73; E 值=2.02e-06 | UniProtKB/Swiss-Prot DAT 2026 current_release |