基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_019996 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr04:46673623-46686225 (+) |
| 描述 | Similar to SYD: Chromatin structure-remodeling complex protein SYD (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源：OH1004 · LXL04_019996 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 41 条 GO 注释和 6 条 KEGG 基因交叉引用；只下载当前查询结果，不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因；橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At2g28290 |
染色质结构重塑复合体（RSC）的催化组分，参与转录调控和核小体定位。 | 暂无已核实直接文献 |
At3g06010 |
可能的染色质重塑因子，在根和茎干细胞起始、根尖分生组织 和茎尖分生组织 维持中与 CHR23 功能冗余。 |
The SWI/SNF chromatin-remodeling gene AtCHR12 mediates temporary growth arrest in Arabidopsis thaliana upon perceiving environmental stress.2007 · DOI: 10.1111/j.1365-313x.2007.03185.x
|
水稻
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
Os05g0144300 |
可能的染色质重塑因子，参与根及茎端干细胞的建立，以及根尖分生组织（RAM）和茎尖分生组织（SAM）的维持。 | 暂无已核实直接文献 |
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目，保留原始同源转移证据及覆盖度；其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006338 | chromatin remodeling | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=43.629; 覆盖度=31.792; E 值=0.0; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006351 | DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.293; 覆盖度=66.203; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006357 | regulation of transcription by RNA polymerase II | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=41.604; 覆盖度=32.651; E 值=7.77e-179; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006952 | defense response | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.293; 覆盖度=66.203; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007064 | mitotic sister chromatid cohesion | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=43.629; 覆盖度=31.792; E 值=0.0; UniProt GO evidence=IMP:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009408 | response to heat | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=44.582; 覆盖度=29.828; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009414 | response to water deprivation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=44.582; 覆盖度=29.828; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009611 | response to wounding | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.293; 覆盖度=66.203; E 值=0.0; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009651 | response to salt stress | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=44.582; 覆盖度=29.828; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009873 | ethylene-activated signaling pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.293; 覆盖度=66.203; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009908 | flower development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.293; 覆盖度=66.203; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010078 | maintenance of root meristem identity | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=44.582; 覆盖度=29.828; E 值=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010104 | regulation of ethylene-activated signaling pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.293; 覆盖度=66.203; E 值=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010199 | organ boundary specification between lateral organs and the meristem | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.293; 覆盖度=66.203; E 值=0.0; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010231 | maintenance of seed dormancy | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=44.582; 覆盖度=29.828; E 值=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010492 | maintenance of shoot apical meristem identity | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=44.582; 覆盖度=29.828; E 值=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031507 | heterochromatin formation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.293; 覆盖度=66.203; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033696 | heterochromatin boundary formation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=43.629; 覆盖度=31.792; E 值=0.0; UniProt GO evidence=IMP:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0040029 | epigenetic regulation of gene expression | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.293; 覆盖度=66.203; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045815 | transcription initiation-coupled chromatin remodeling | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=43.629; 覆盖度=31.792; E 值=0.0; UniProt GO evidence=IC:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045944 | positive regulation of transcription by RNA polymerase II | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.293; 覆盖度=66.203; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0120262 | negative regulation of heterochromatin organization | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=41.604; 覆盖度=32.651; E 值=7.77e-179; UniProt GO evidence=IMP:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1900150 | regulation of defense response to fungus | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.293; 覆盖度=66.203; E 值=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000022 | regulation of jasmonic acid mediated signaling pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.293; 覆盖度=66.203; E 值=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000785 | chromatin | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.293; 覆盖度=66.203; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.293; 覆盖度=66.203; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.293; 覆盖度=66.203; E 值=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016514 | SWI/SNF complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=41.604; 覆盖度=32.651; E 值=7.77e-179; UniProt GO evidence=IDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016586 | RSC-type complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=43.629; 覆盖度=31.792; E 值=0.0; UniProt GO evidence=IDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0072686 | mitotic spindle | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=41.604; 覆盖度=32.651; E 值=7.77e-179; UniProt GO evidence=HDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.293; 覆盖度=66.203; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003678 | DNA helicase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=44.582; 覆盖度=29.828; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003682 | chromatin binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.293; 覆盖度=66.203; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004386 | helicase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.293; 覆盖度=66.203; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.293; 覆盖度=66.203; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016787 | hydrolase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=42.59; 覆盖度=30.646; E 值=1.33e-178; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016887 | ATP hydrolysis activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.293; 覆盖度=66.203; E 值=0.0; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042393 | histone binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.293; 覆盖度=66.203; E 值=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140463 | chromatin-protein adaptor activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=43.629; 覆盖度=31.792; E 值=0.0; UniProt GO evidence=EXP:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140750 | nucleosome array spacer activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.293; 覆盖度=66.203; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140751 | histone octamer slider activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=43.629; 覆盖度=31.792; E 值=0.0; UniProt GO evidence=IMP:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G28290 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.293; 覆盖度=66.203; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G06010 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=44.582; 覆盖度=29.828; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os05g0144300 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=42.59; 覆盖度=30.646; E 值=1.33e-178 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | osa:4337784 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=42.59; 覆盖度=30.646; E 值=1.33e-178 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | spo:2538881 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=41.604; 覆盖度=32.651; E 值=7.77e-179 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | spo:2542638 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=43.629; 覆盖度=31.792; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release |