基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_013357 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr03:28412870-28414206 (-) |
| 描述 | Similar to PRE6: Transcription factor PRE6 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源：OH1004 · LXL04_013357 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 16 条 GO 注释和 5 条 KEGG 基因交叉引用；只下载当前查询结果，不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因；橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At1g26945 |
非典型且可能不与DNA结合的bHLH转录因子，通过结合并抑制bHLH转录因子HFR1的活性来调节光介导的昼光反应，HFR1是光信号和遮荫回避的重要调节因子。 | 暂无已核实直接文献 |
At3g28857 |
非典型且可能非 DNA 结合的 bHLH 转录因子，整合多个信号通路来调节细胞伸长和植物发育。 | 暂无已核实直接文献 |
At5g15160 |
非典型且可能非 DNA 结合的 bHLH 转录因子，整合多个信号通路来调节细胞伸长和植物发育。 | |
At5g39860 |
非典型且可能非 DNA 结合的 bHLH 转录因子，整合多个信号通路来调节细胞伸长和植物发育。 |
Overexpression of PRE1 and its homologous genes activates Gibberellin-dependent responses in Arabidopsis thaliana.2006 · DOI: 10.1093/pcp/pcj026 Antagonistic HLH/bHLH transcription factors mediate brassinosteroid regulation of cell elongation and plant development in rice and Arabidopsis.2009 · DOI: 10.1105/tpc.109.070441 The Arabidopsis floral homeotic proteins APETALA3 and PISTILLATA negatively regulate the BANQUO genes implicated in light signaling.2010 · DOI: 10.1105/tpc.109.065946
|
水稻
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
Os03g0171300 |
非典型且可能非 DNA 结合的 bHLH 转录因子，可作为颗粒大小的正调节因子。 |
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目，保留原始同源转移证据及覆盖度；其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006351 | DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=73.333; 覆盖度=37.879; E 值=2.32e-33; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006355 | regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=73.333; 覆盖度=37.879; E 值=2.32e-33; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009416 | response to light stimulus | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=73.333; 覆盖度=37.879; E 值=2.32e-33; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009640 | photomorphogenesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=75.0; 覆盖度=38.384; E 值=1.85e-32; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009740 | gibberellic acid mediated signaling pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=62.791; 覆盖度=43.434; E 值=1.01e-32; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009741 | response to brassinosteroid | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=63.291; 覆盖度=39.899; E 值=2.27e-30; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009742 | brassinosteroid mediated signaling pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=63.291; 覆盖度=39.899; E 值=2.27e-30; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009826 | unidimensional cell growth | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=63.291; 覆盖度=39.899; E 值=2.27e-30; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0040008 | regulation of growth | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=73.333; 覆盖度=37.879; E 值=2.32e-33; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048510 | regulation of timing of transition from vegetative to reproductive phase | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=75.0; 覆盖度=38.384; E 值=1.85e-32; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080113 | regulation of seed growth | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=63.158; 覆盖度=38.384; E 值=3.87e-26; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000325 | plant-type vacuole | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=75.0; 覆盖度=38.384; E 值=1.85e-32; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=73.333; 覆盖度=37.879; E 值=2.32e-33; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=73.333; 覆盖度=37.879; E 值=2.32e-33; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=75.0; 覆盖度=38.384; E 值=1.85e-32; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046983 | protein dimerization activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=73.333; 覆盖度=37.879; E 值=2.32e-33; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G26945 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=73.333; 覆盖度=37.879; E 值=2.32e-33 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G28857 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=62.791; 覆盖度=43.434; E 值=1.01e-32 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G15160 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=75.0; 覆盖度=38.384; E 值=1.85e-32 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G39860 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=63.291; 覆盖度=39.899; E 值=2.27e-30 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os03g0171300 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=63.158; 覆盖度=38.384; E 值=3.87e-26 | UniProtKB/Swiss-Prot DAT 2026 current_release |