基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_009658 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr02:130811160-130812971 (+) |
| 描述 | Similar to MSI3: WD-40 repeat-containing protein MSI3 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源：OH1004 · LXL04_009658 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 26 条 GO 注释和 5 条 KEGG 基因交叉引用；只下载当前查询结果，不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因；橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At4g35050 |
核心组蛋白结合亚基，可能以核小体 DNA 调节的方式将染色质组装因子、染色质重塑因子和组蛋白脱乙酰酶靶向其组蛋白底物。 | 暂无已核实直接文献 |
At2g16780 |
核心组蛋白结合亚基，可能以核小体 DNA 调节的方式将染色质组装因子、染色质重塑因子和组蛋白脱乙酰酶靶向其组蛋白底物。 | 暂无已核实直接文献 |
At5g58230 |
核心组蛋白结合亚基，可能以核小体 DNA 调节的方式将染色质组装因子、染色质重塑因子和组蛋白脱乙酰酶靶向其组蛋白底物。 |
Arabidopsis MSI1 is required for epigenetic maintenance of reproductive development.2003 · DOI: 10.1242/dev.00470 Arabidopsis MSI1 is a component of the MEA/FIE Polycomb group complex and required for seed development.2003 · DOI: 10.1093/emboj/cdg444 Identification of new members of Fertilisation Independent Seed Polycomb Group pathway involved in the control of seed development in Arabidopsis thaliana.2004 · DOI: 10.1242/dev.01168 Loss of function of MULTICOPY SUPPRESSOR OF IRA 1 produces nonviable parthenogenetic embryos in Arabidopsis.2005 · DOI: 10.1016/j.cub.2005.02.066
|
水稻
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
Os03g0640100 |
核心组蛋白结合亚基，可能以核小体 DNA 调节的方式将染色质组装因子、染色质重塑因子和组蛋白脱乙酰酶靶向其组蛋白底物。 | 暂无已核实直接文献 |
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目，保留原始同源转移证据及覆盖度；其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006260 | DNA replication | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=58.794; 覆盖度=94.537; E 值=4.74e-166; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006281 | DNA repair | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=58.794; 覆盖度=94.537; E 值=4.74e-166; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006310 | DNA recombination | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=57.855; 覆盖度=95.249; E 值=1.31e-160; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006338 | chromatin remodeling | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=69.75; 覆盖度=95.012; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006351 | DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=69.75; 覆盖度=95.012; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006355 | regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=69.75; 覆盖度=95.012; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009555 | pollen development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=58.794; 覆盖度=94.537; E 值=4.74e-166; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009793 | embryo development ending in seed dormancy | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=58.794; 覆盖度=94.537; E 值=4.74e-166; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009908 | flower development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=58.794; 覆盖度=94.537; E 值=4.74e-166; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009909 | regulation of flower development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=58.794; 覆盖度=94.537; E 值=4.74e-166; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010026 | trichome differentiation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=58.794; 覆盖度=94.537; E 值=4.74e-166; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010214 | seed coat development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=58.794; 覆盖度=94.537; E 值=4.74e-166; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016480 | negative regulation of transcription by RNA polymerase III | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=58.794; 覆盖度=94.537; E 值=4.74e-166; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031507 | heterochromatin formation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=58.794; 覆盖度=94.537; E 值=4.74e-166; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045787 | positive regulation of cell cycle | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=58.794; 覆盖度=94.537; E 值=4.74e-166; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048316 | seed development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=58.794; 覆盖度=94.537; E 值=4.74e-166; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048366 | leaf development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=58.794; 覆盖度=94.537; E 值=4.74e-166; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070828 | heterochromatin organization | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=58.794; 覆盖度=94.537; E 值=4.74e-166; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=69.75; 覆盖度=95.012; E 值=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005677 | chromatin silencing complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=58.794; 覆盖度=94.537; E 值=4.74e-166; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031010 | ISWI-type complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=69.75; 覆盖度=95.012; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032991 | protein-containing complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=58.794; 覆盖度=94.537; E 值=4.74e-166; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070176 | DRM complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=58.794; 覆盖度=94.537; E 值=4.74e-166; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080008 | Cul4-RING E3 ubiquitin ligase complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=69.75; 覆盖度=95.012; E 值=0.0; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0001222 | transcription corepressor binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=58.794; 覆盖度=94.537; E 值=4.74e-166; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042393 | histone binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=69.75; 覆盖度=95.012; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G16780 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=69.5; 覆盖度=95.012; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G35050 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=69.75; 覆盖度=95.012; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G58230 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=58.794; 覆盖度=94.537; E 值=4.74e-166 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os03g0640100 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=57.855; 覆盖度=95.249; E 值=1.31e-160 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | sly:543534 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=56.49; 覆盖度=98.812; E 值=1.09e-163 | UniProtKB/Swiss-Prot DAT 2026 current_release |