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基因注释

展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。

示例 TkA01G624900 LXL04_000258 文献示例 LXL04_039733 TkAUNG001940

查询结果

下载当前结果

基因 IDLXL04_009204
当前查询版本OH1004
位置Chr02:120394911-120395685 (+)
描述Similar to DCL4: Endoribonuclease Dicer homolog 4 (Oryza sativa subsp. japonica OX%3D39947)
注释来源组装GCA_047496595.1_OSU_TarKok_2.0

功能注释来源：OH1004 · LXL04_009204 · GCA_047496595.1_OSU_TarKok_2.0。

当前查询返回来自 OH1004 注释条目的 35 条 GO 注释和 5 条 KEGG 基因交叉引用；只下载当前查询结果，不据此推断 KEGG 通路成员。

拟南芥 / 水稻参考基因与文献

文献对应拟南芥或水稻参考基因；橡胶草的功能关联来自当前参考组装的蛋白序列比对。

下载当前基因文献

拟南芥

参考基因 ID可能功能对应论文 / DOI
At5g20320 核糖核酸酶 III 参与 RNA 介导的转录后基因沉默。
Partially redundant functions of Arabidopsis DICER-like enzymes and a role for DCL4 in producing trans-acting siRNAs.2005 · DOI: 10.1016/j.cub.2005.07.024
DICER-LIKE 4 functions in trans-acting small interfering RNA biogenesis and vegetative phase change in Arabidopsis thaliana.2005 · DOI: 10.1073/pnas.0506426102
A pathway for the biogenesis of trans-acting siRNAs in Arabidopsis.2005 · DOI: 10.1101/gad.1352605
DICER-LIKE 4 is required for RNA interference and produces the 21-nucleotide small interfering RNA component of the plant cell-to-cell silencing signal.2005 · DOI: 10.1038/ng1675
DRB4-dependent TAS3 trans-acting siRNAs control leaf morphology through AGO7.2006 · DOI: 10.1016/j.cub.2006.03.035
An antagonistic function for Arabidopsis DCL2 in development and a new function for DCL4 in generating viral siRNAs.2006 · DOI: 10.1038/sj.emboj.7601217
Suppression of antiviral silencing by cucumber mosaic virus 2b protein in Arabidopsis is associated with drastically reduced accumulation of three classes of viral small interfering RNAs.2007 · DOI: 10.1105/tpc.106.047449
Transitivity in Arabidopsis can be primed, requires the redundant action of the antiviral Dicer-like 4 and Dicer-like 2, and is compromised by viral-encoded suppressor proteins.2007 · DOI: 10.1261/rna.541307
A novel class of bacteria-induced small RNAs in Arabidopsis.2007 · DOI: 10.1101/gad.1595107
Arabidopsis DRB4, AGO1, AGO7, and RDR6 participate in a DCL4-initiated antiviral RNA silencing pathway negatively regulated by DCL1.2008 · DOI: 10.1073/pnas.0805760105
At1g80650 核糖核酸酶 3 样蛋白 1。 暂无已核实直接文献
At1g01040 核糖核酸酶 III 参与 RNA 介导的转录后基因沉默。
Specific interactions between Dicer-like proteins and HYL1/DRB-family dsRNA-binding proteins in Arabidopsis thaliana.2005 · DOI: 10.1007/s11103-004-6853-5
Partially redundant functions of Arabidopsis DICER-like enzymes and a role for DCL4 in producing trans-acting siRNAs.2005 · DOI: 10.1016/j.cub.2005.07.024
The interaction between DCL1 and HYL1 is important for efficient and precise processing of pri-miRNA in plant microRNA biogenesis.2006 · DOI: 10.1261/rna.2146906
A novel class of bacteria-induced small RNAs in Arabidopsis.2007 · DOI: 10.1101/gad.1595107
The RNA-binding proteins HYL1 and SE promote accurate in vitro processing of pri-miRNA by DCL1.2008 · DOI: 10.1073/pnas.0803356105
Arabidopsis DRB4, AGO1, AGO7, and RDR6 participate in a DCL4-initiated antiviral RNA silencing pathway negatively regulated by DCL1.2008 · DOI: 10.1073/pnas.0805760105

水稻

参考基因 ID可能功能对应论文 / DOI
Os04g0509300 参与 RNA 沉默途径。
The small interfering RNA production pathway is required for shoot meristem initiation in rice.2007 · DOI: 10.1073/pnas.0704339104
Oryza sativa dicer-like4 reveals a key role for small interfering RNA silencing in plant development.2007 · DOI: 10.1105/tpc.107.052209
Os03g0121800 参与 RNA 沉默途径。
Loss of function of OsDCL1 affects microRNA accumulation and causes developmental defects in rice.2005 · DOI: 10.1104/pp.105.063420
Genome-wide analysis for discovery of rice microRNAs reveals natural antisense microRNAs (nat-miRNAs).2008 · DOI: 10.1073/pnas.0708743105

GO / KEGG

以下 GO/KEGG 注释源自上述 OH1004 注释条目，保留原始同源转移证据及覆盖度；其来源物种范围与拟南芥/水稻直接比对表不同。

类型ID名称命名空间证据来源
GOGO:0000911cytokinesis by cell plate formation生物过程Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.294; 覆盖度=50.37; E 值=2.99e-06; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006353DNA-templated transcription termination生物过程Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=42.708; 覆盖度=71.111; E 值=5.46e-15; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006364rRNA processing生物过程Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.294; 覆盖度=50.37; E 值=2.99e-06; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006396RNA processing生物过程Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.294; 覆盖度=50.37; E 值=2.99e-06; UniProt GO evidence=ISS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009616RNAi-mediated antiviral immune response生物过程Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=42.708; 覆盖度=71.111; E 值=5.46e-15; UniProt GO evidence=IGI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009880embryonic pattern specification生物过程Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.294; 覆盖度=50.37; E 值=2.99e-06; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009908flower development生物过程Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.294; 覆盖度=50.37; E 值=2.99e-06; UniProt GO evidence=TAS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009944polarity specification of adaxial/abaxial axis生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=40.65; 覆盖度=91.111; E 值=1.37e-18; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010050vegetative phase change生物过程Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=42.708; 覆盖度=71.111; E 值=5.46e-15; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010228vegetative to reproductive phase transition of meristem生物过程Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.294; 覆盖度=50.37; E 值=2.99e-06; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010267ta-siRNA processing生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=40.65; 覆盖度=91.111; E 值=1.37e-18; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010492maintenance of shoot apical meristem identity生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=40.65; 覆盖度=91.111; E 值=1.37e-18; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010599lsiRNA processing生物过程Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=42.708; 覆盖度=71.111; E 值=5.46e-15; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0030422siRNA processing生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=40.65; 覆盖度=91.111; E 值=1.37e-18; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031053primary miRNA processing生物过程Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.294; 覆盖度=50.37; E 值=2.99e-06; UniProt GO evidence=TAS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0035196miRNA processing生物过程Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=32.955; 覆盖度=65.185; E 值=7.67e-08; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0035279miRNA-mediated gene silencing by mRNA destabilization生物过程Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.294; 覆盖度=50.37; E 值=2.99e-06; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0044027negative regulation of gene expression via chromosomal CpG island methylation生物过程Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=42.708; 覆盖度=71.111; E 值=5.46e-15; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048317seed morphogenesis生物过程Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.294; 覆盖度=50.37; E 值=2.99e-06; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048608reproductive structure development生物过程Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=40.65; 覆盖度=91.111; E 值=1.37e-18; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0051214RNAi-mediated antiviral immunity against RNA virus生物过程Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=42.708; 覆盖度=71.111; E 值=5.46e-15; UniProt GO evidence=IGI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0051607defense response to virus生物过程Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=42.708; 覆盖度=71.111; E 值=5.46e-15; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:2000034regulation of seed maturation生物过程Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.294; 覆盖度=50.37; E 值=2.99e-06; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleus细胞组分Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=40.65; 覆盖度=91.111; E 值=1.37e-18; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasm细胞组分Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=40.65; 覆盖度=91.111; E 值=1.37e-18; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005829cytosol细胞组分Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=42.708; 覆盖度=71.111; E 值=5.46e-15; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010445nuclear dicing body细胞组分Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.294; 覆盖度=50.37; E 值=2.99e-06; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0036464cytoplasmic ribonucleoprotein granule细胞组分Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=42.708; 覆盖度=71.111; E 值=5.46e-15; UniProt GO evidence=IDA:FlyBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003677DNA binding分子功能Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.294; 覆盖度=50.37; E 值=2.99e-06; UniProt GO evidence=IDA:DisProtUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003723RNA binding分子功能Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=40.65; 覆盖度=91.111; E 值=1.37e-18; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003725double-stranded RNA binding分子功能Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.294; 覆盖度=50.37; E 值=2.99e-06; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0004386helicase activity分子功能Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=40.65; 覆盖度=91.111; E 值=1.37e-18; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0004525ribonuclease III activity分子功能Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=40.65; 覆盖度=91.111; E 值=1.37e-18; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005524ATP binding分子功能Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=40.65; 覆盖度=91.111; E 值=1.37e-18; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0046872metal ion binding分子功能Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=40.65; 覆盖度=91.111; E 值=1.37e-18; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G01040KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.294; 覆盖度=50.37; E 值=2.99e-06UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G80650KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed 同源转移; 命中排序=3; 一致性=50.0; 覆盖度=59.259; E 值=5.71e-15UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G20320KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed 同源转移; 命中排序=2; 一致性=42.708; 覆盖度=71.111; E 值=5.46e-15UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os03g0121800KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed 同源转移; 命中排序=4; 一致性=32.955; 覆盖度=65.185; E 值=7.67e-08UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os04g0509300KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed 同源转移; 命中排序=1; 一致性=40.65; 覆盖度=91.111; E 值=1.37e-18UniProtKB/Swiss-Prot DAT 2026 current_release