基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_008567 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr02:102881705-102884595 (-) |
| 描述 | Similar to HCF173: Protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173%2C chloroplastic (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_008567 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 24 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At1g16720 |
与HCF244共同参与光系统Ⅱ(PSII)生物发生的辅助因子,尤其通过调控相应mRNA(如psbA)的翻译起始(核糖体装载)及其稳定性,支持反应中心蛋白(如D1)的合成。 | |
At5g02240 |
未经表征的蛋白质 At5g02240。 | 暂无已核实直接文献 |
At2g37660 |
未表征蛋白 At2g37660,叶绿体的。 | 暂无已核实直接文献 |
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006413 | translational initiation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=81.4; 覆盖度=83.195; E 值=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009737 | response to abscisic acid | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=34.0; 覆盖度=16.639; E 值=2.89e-07; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010207 | photosystem II assembly | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=81.4; 覆盖度=83.195; E 值=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015979 | photosynthesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=35.052; 覆盖度=16.14; E 值=2.65e-07; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015995 | chlorophyll biosynthetic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=37.069; 覆盖度=19.301; E 值=1.71e-06; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000325 | plant-type vacuole | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=34.0; 覆盖度=16.639; E 值=2.89e-07; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005783 | endoplasmic reticulum | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=33.01; 覆盖度=17.138; E 值=2.08e-06; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=34.0; 覆盖度=16.639; E 值=2.89e-07; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=34.0; 覆盖度=16.639; E 值=2.89e-07; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=81.4; 覆盖度=83.195; E 值=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009523 | photosystem II | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=81.4; 覆盖度=83.195; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009535 | chloroplast thylakoid membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=81.4; 覆盖度=83.195; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009570 | chloroplast stroma | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=81.4; 覆盖度=83.195; E 值=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009579 | thylakoid | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=33.01; 覆盖度=17.138; E 值=2.08e-06; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009941 | chloroplast envelope | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=81.4; 覆盖度=83.195; E 值=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031969 | chloroplast membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=81.4; 覆盖度=83.195; E 值=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042651 | thylakoid membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=81.4; 覆盖度=83.195; E 值=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048046 | apoplast | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=34.0; 覆盖度=16.639; E 值=2.89e-07; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=81.4; 覆盖度=83.195; E 值=0.0; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003729 | mRNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=81.4; 覆盖度=83.195; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005507 | copper ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=33.01; 覆盖度=17.138; E 值=2.08e-06; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016491 | oxidoreductase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=35.052; 覆盖度=16.14; E 值=2.65e-07; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016854 | racemase and epimerase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=81.4; 覆盖度=83.195; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033728 | 3,8-divinyl protochlorophyllide a 8-vinyl-reductase (NADPH) activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=37.069; 覆盖度=19.301; E 值=1.71e-06; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G16720 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=81.4; 覆盖度=83.195; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G37660 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=33.01; 覆盖度=17.138; E 值=2.08e-06 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G02240 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=34.0; 覆盖度=16.639; E 值=2.89e-07 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | syn:slr0399 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=35.052; 覆盖度=16.14; E 值=2.65e-07 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | zma:100281890 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=37.069; 覆盖度=19.301; E 值=1.71e-06 | UniProtKB/Swiss-Prot DAT 2026 current_release |