基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_005524 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr01:166644712-166647367 (+) |
| 描述 | Similar to MYB61: Transcription factor MYB61 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_005524 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 18 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At1g09540 |
协调下游靶基因小型网络的转录因子;这些基因参与木质部形成、木质部细胞分化、侧根形成等多个植物生长发育过程。 |
AtMYB61, an R2R3-MYB transcription factor controlling stomatal aperture in Arabidopsis thaliana.2005 · DOI: 10.1016/j.cub.2005.06.041 MUM ENHANCERS are important for seed coat mucilage production and mucilage secretory cell differentiation in Arabidopsis thaliana.2009 · DOI: 10.1093/jxb/erp102 AtMYB61, an R2R3-MYB transcription factor, functions as a pleiotropic regulator via a small gene network.2012 · DOI: 10.1111/j.1469-8137.2012.04201.x
|
At3g13890 |
可能是转录因子,调控花药内壁次生细胞壁增厚,这是花药裂开所必需的。 |
Disruption of Arabidopsis thaliana MYB26 results in male sterility due to non-dehiscent anthers.2003 · DOI: 10.1046/j.1365-313x.2003.01745.x
|
At5g26660 |
可能的转录因子。 | 暂无已核实直接文献 |
At4g34990 |
转录因子MYB32。 | 暂无已核实直接文献 |
At3g01140 |
作为表皮细胞生长的抑制因子,并负向调控毛状体分支形成。 |
Transcriptional profiling of mature Arabidopsis trichomes reveals that NOECK encodes the MIXTA-like transcriptional regulator MYB106.2008 · DOI: 10.1104/pp.108.126979
|
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0000902 | cell morphogenesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=63.793; 覆盖度=36.943; E 值=8.38e-53; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006351 | DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.261; 覆盖度=63.376; E 值=5.3e-63; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006355 | regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.261; 覆盖度=63.376; E 值=5.3e-63; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009737 | response to abscisic acid | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=55.782; 覆盖度=46.815; E 值=2.14e-54; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009738 | abscisic acid-activated signaling pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=55.782; 覆盖度=46.815; E 值=2.14e-54; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009834 | plant-type secondary cell wall biogenesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=59.236; 覆盖度=50.0; E 值=2.53e-62; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010087 | phloem or xylem histogenesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.261; 覆盖度=63.376; E 值=5.3e-63; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010089 | xylem development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.261; 覆盖度=63.376; E 值=5.3e-63; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010091 | trichome branching | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=63.793; 覆盖度=36.943; E 值=8.38e-53; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010119 | regulation of stomatal movement | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.261; 覆盖度=63.376; E 值=5.3e-63; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010214 | seed coat development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.261; 覆盖度=63.376; E 值=5.3e-63; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045892 | negative regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=63.448; 覆盖度=46.178; E 值=3.23e-61; UniProt GO evidence=TAS:TIGR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048364 | root development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.261; 覆盖度=63.376; E 值=5.3e-63; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1901957 | regulation of cutin biosynthetic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=63.793; 覆盖度=36.943; E 值=8.38e-53; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.261; 覆盖度=63.376; E 值=5.3e-63; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000976 | transcription cis-regulatory region binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.261; 覆盖度=63.376; E 值=5.3e-63; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=63.793; 覆盖度=36.943; E 值=8.38e-53; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.261; 覆盖度=63.376; E 值=5.3e-63; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G09540 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.261; 覆盖度=63.376; E 值=5.3e-63 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G01140 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=63.793; 覆盖度=36.943; E 值=8.38e-53 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G13890 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=59.236; 覆盖度=50.0; E 值=2.53e-62 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G34990 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=55.782; 覆盖度=46.815; E 值=2.14e-54 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G26660 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=63.448; 覆盖度=46.178; E 值=3.23e-61 | UniProtKB/Swiss-Prot DAT 2026 current_release |