基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_004482 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr01:137622405-137624424 (+) |
| 描述 | Similar to GRIK2: Serine/threonine-protein kinase GRIK2 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_004482 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 29 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At5g60550 |
分别通过磷酸化激活环“Thr-198”和“Thr-176”来激活 SnRK1.1/KIN10 和 SnRK1.2/KIN11。 |
Geminivirus infection up-regulates the expression of two Arabidopsis protein kinases related to yeast SNF1- and mammalian AMPK-activating kinases.2006 · DOI: 10.1104/pp.106.088476 DNA sequences from Arabidopsis, which encode protein kinases and function as upstream regulators of Snf1 in yeast.2007 · DOI: 10.1074/jbc.m611244200
|
At3g45240 |
分别通过磷酸化激活环“Thr-198”和“Thr-176”来激活 SnRK1.1/KIN10 和 SnRK1.2/KIN11。 |
Geminivirus infection up-regulates the expression of two Arabidopsis protein kinases related to yeast SNF1- and mammalian AMPK-activating kinases.2006 · DOI: 10.1104/pp.106.088476 DNA sequences from Arabidopsis, which encode protein kinases and function as upstream regulators of Snf1 in yeast.2007 · DOI: 10.1074/jbc.m611244200
|
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006468 | protein phosphorylation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.717; 覆盖度=101.891; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009615 | response to virus | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.717; 覆盖度=101.891; E 值=0.0; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010514 | induction of conjugation with cellular fusion | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=40.199; 覆盖度=71.158; E 值=6.12e-57; UniProt GO evidence=EXP:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010971 | positive regulation of G2/M transition of mitotic cell cycle | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=40.199; 覆盖度=71.158; E 值=6.12e-57; UniProt GO evidence=IMP:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019722 | calcium-mediated signaling | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=41.017; 覆盖度=69.74; E 值=1.38e-55; UniProt GO evidence=TAS:WormBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032956 | regulation of actin cytoskeleton organization | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=40.199; 覆盖度=71.158; E 值=6.12e-57; UniProt GO evidence=IMP:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035556 | intracellular signal transduction | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.717; 覆盖度=101.891; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042149 | cellular response to glucose starvation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=40.199; 覆盖度=71.158; E 值=6.12e-57; UniProt GO evidence=IMP:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046777 | protein autophosphorylation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=61.466; 覆盖度=100.0; E 值=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051523 | cell growth mode switching, monopolar to bipolar | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=40.199; 覆盖度=71.158; E 值=6.12e-57; UniProt GO evidence=IMP:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051726 | regulation of cell cycle | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=40.199; 覆盖度=71.158; E 值=6.12e-57; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061762 | CAMKK-AMPK signaling cascade | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=40.199; 覆盖度=71.158; E 值=6.12e-57; UniProt GO evidence=IC:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140648 | positive regulation of cell cycle switching, mitotic to meiotic cell cycle | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=40.199; 覆盖度=71.158; E 值=6.12e-57; UniProt GO evidence=EXP:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1904262 | negative regulation of TORC1 signaling | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=40.199; 覆盖度=71.158; E 值=6.12e-57; UniProt GO evidence=IMP:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.717; 覆盖度=101.891; E 值=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.717; 覆盖度=101.891; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=40.199; 覆盖度=71.158; E 值=6.12e-57; UniProt GO evidence=HDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=61.466; 覆盖度=100.0; E 值=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032153 | cell division site | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=40.199; 覆盖度=71.158; E 值=6.12e-57; UniProt GO evidence=IDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051285 | cell cortex of cell tip | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=40.199; 覆盖度=71.158; E 值=6.12e-57; UniProt GO evidence=IDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902716 | cell cortex of growing cell tip | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=40.199; 覆盖度=71.158; E 值=6.12e-57; UniProt GO evidence=IDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004672 | protein kinase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.717; 覆盖度=101.891; E 值=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004674 | protein serine/threonine kinase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.717; 覆盖度=101.891; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004683 | calcium/calmodulin-dependent protein kinase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=40.199; 覆盖度=71.158; E 值=6.12e-57; UniProt GO evidence=ISS:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005516 | calmodulin binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=40.199; 覆盖度=71.158; E 值=6.12e-57; UniProt GO evidence=ISS:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.717; 覆盖度=101.891; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016301 | kinase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.717; 覆盖度=101.891; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046872 | metal ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=41.017; 覆盖度=69.74; E 值=1.38e-55; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0106310 | protein serine kinase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.717; 覆盖度=101.891; E 值=0.0; UniProt GO evidence=IEA:RHEA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G45240 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=61.466; 覆盖度=100.0; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G60550 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.717; 覆盖度=101.891; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | cel:CELE_C05H8.1 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=41.017; 覆盖度=69.74; E 值=1.38e-55 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ddi:DDB_G0279405 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=42.361; 覆盖度=68.085; E 值=1.77e-64 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | spo:2538951 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=40.199; 覆盖度=71.158; E 值=6.12e-57 | UniProtKB/Swiss-Prot DAT 2026 current_release |