基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_002706 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr01:55483651-55490742 (+) |
| 描述 | Similar to LCB1: Long chain base biosynthesis protein 1 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_002706 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 18 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At4g36480 |
丝氨酸棕榈酰转移酶 的组分,催化鞘脂合成中的关键步骤,即丝氨酸与棕榈酰辅酶 A 缩合形成长链碱基 3-酮二氢鞘氨醇。 |
The essential nature of sphingolipids in plants as revealed by the functional identification and characterization of the Arabidopsis LCB1 subunit of serine palmitoyltransferase.2006 · DOI: 10.1105/tpc.105.040774
|
水稻
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
Os03g0252800 |
丝氨酸棕榈酰转移酶 (SPT)。 | 暂无已核实直接文献 |
Os02g0806900 |
丝氨酸棕榈酰转移酶 (SPT)。 | 暂无已核实直接文献 |
Os10g0189600 |
丝氨酸棕榈酰转移酶 (SPT)。 | 暂无已核实直接文献 |
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006665 | sphingolipid metabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=47.216; 覆盖度=51.314; E 值=6.18e-128; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006686 | sphingomyelin biosynthetic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=47.216; 覆盖度=51.314; E 值=6.18e-128; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006688 | glycosphingolipid biosynthetic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=47.216; 覆盖度=51.314; E 值=6.18e-128; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009793 | embryo development ending in seed dormancy | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=73.849; 覆盖度=54.629; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009825 | multidimensional cell growth | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=73.849; 覆盖度=54.629; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030148 | sphingolipid biosynthetic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=73.849; 覆盖度=54.629; E 值=0.0; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043067 | regulation of programmed cell death | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=73.849; 覆盖度=54.629; E 值=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046511 | sphinganine biosynthetic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=47.216; 覆盖度=51.314; E 值=6.18e-128; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046512 | sphingosine biosynthetic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=73.849; 覆盖度=54.629; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046513 | ceramide biosynthetic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=73.849; 覆盖度=54.629; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1904504 | positive regulation of lipophagy | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=47.216; 覆盖度=51.314; E 值=6.18e-128; UniProt GO evidence=ISO:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005783 | endoplasmic reticulum | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=73.849; 覆盖度=54.629; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005789 | endoplasmic reticulum membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=73.849; 覆盖度=54.629; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=73.849; 覆盖度=54.629; E 值=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0017059 | serine palmitoyltransferase complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=47.216; 覆盖度=51.314; E 值=6.18e-128; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0098554 | cytoplasmic side of endoplasmic reticulum membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=47.216; 覆盖度=51.314; E 值=6.18e-128; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004758 | serine C-palmitoyltransferase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=73.849; 覆盖度=54.629; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030170 | pyridoxal phosphate binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=73.849; 覆盖度=54.629; E 值=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT4G36480 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=73.849; 覆盖度=54.629; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os02g0806900 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=72.451; 覆盖度=52.686; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os03g0252800 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=70.86; 覆盖度=54.514; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os10g0189600 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=70.282; 覆盖度=52.686; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:268656 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=47.216; 覆盖度=51.314; E 值=6.18e-128 | UniProtKB/Swiss-Prot DAT 2026 current_release |