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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDTkAUNG047230
Query referenceTK1151
LocationChrUn:13077999-13081827 (+)
DescriptionSimilar to PMA4: Plasma membrane ATPase 4 (Nicotiana plumbaginifolia OX%3D4092)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_017998 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 14 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At4g30190 The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport.
Mechanism of proton transport by plant plasma membrane proton ATPases.2003 · DOI: 10.1007/s10265-003-0111-9
The effect of a genetically reduced plasma membrane protonmotive force on vegetative growth of Arabidopsis.2012 · DOI: 10.1104/pp.111.189167
Abscisic acid suppresses hypocotyl elongation by dephosphorylating plasma membrane H(+)-ATPase in Arabidopsis thaliana.2014 · DOI: 10.1093/pcp/pcu028
The plasma membrane H(+) -ATPase AHA2 contributes to the root architecture in response to different nitrogen supply.2015 · DOI: 10.1111/ppl.12305
Phytosulfokine Regulates Growth in Arabidopsis through a Response Module at the Plasma Membrane That Includes CYCLIC NUCLEOTIDE-GATED CHANNEL17, H+-ATPase, and BAK1.2015 · DOI: 10.1105/tpc.15.00306
Direct observation of proton pumping by a eukaryotic P-type ATPase.2016 · DOI: 10.1126/science.aad6429
At5g57350 The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
Os04g0656100 The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0051453regulation of intracellular pHBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=88.285; coverage=100.21; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0120029proton export across plasma membraneBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=89.684; coverage=99.581; evalue=0.0; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:1902600proton transmembrane transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=88.285; coverage=100.21; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000325plant-type vacuoleCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=87.012; coverage=99.266; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005794Golgi apparatusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=87.012; coverage=99.266; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005886plasma membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=89.684; coverage=99.581; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009506plasmodesmaCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=87.012; coverage=99.266; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009507chloroplastCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=84.144; coverage=99.161; evalue=0.0; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016020membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=87.012; coverage=99.266; evalue=0.0; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000287magnesium ion bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=87.012; coverage=99.266; evalue=0.0; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005524ATP bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=89.684; coverage=99.581; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0008553P-type proton-exporting transporter activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=89.684; coverage=99.581; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-ECUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016887ATP hydrolysis activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=89.684; coverage=99.581; evalue=0.0; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0046872metal ion bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=89.684; coverage=99.581; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT2G24520KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=84.144; coverage=99.161; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G30190KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=87.012; coverage=99.266; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os04g0656100KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=88.285; coverage=100.21; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release